RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 PLA2G4FQ68DD2 849 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 GALNT4Q8N4A0 578 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 ZNF384Q8TF68 577 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 CENPKQ9BS16 269 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 FBXO6Q9NRD1 293 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 EML1O00423 815 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 TCN1P20061 433 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 SOX10P56693 466 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 GPSM2P81274 684 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 IZUMO2Q6UXV1 221 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 ECHDC2Q86YB7 292 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 NUDCD3Q8IVD9 361 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 NINJ2Q9NZG7 142 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 SUPT3HO75486 399 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 UNC5CO95185 931 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 SOX11P35716 441 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 PRKG1Q13976 671 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 KRT81Q14533 505 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 GEN1Q17RS7 908 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 SLC35G1Q2M3R5 365 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 POU5F2Q8N7G0 328 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 MAGEB18Q96M61 343 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 DDX18Q9NVP1 670 aaKnown RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 NKX1-2Q9UD57 310 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 RNF8O76064 485 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 TJP3O95049 919 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 MYL2P10916 166 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 LMNB2Q03252 620 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 ASPHQ12797 758 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 NLRX1Q86UT6 975 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 TDRD3Q9H7E2 651 aaKnown RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 TMEM206Q9H813 350 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 COG5Q9UP83 839 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 PEX5P50542 639 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 ARL4CP56559 192 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 NFIAQ12857 509 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 DBN1Q16643 649 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 KRT39Q6A163 491 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 CRLF3Q8IUI8 442 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 CYP4X1Q8N118 509 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 MRPL47Q9HD33 250 aaKnown RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 FAM86B1E9PN63 330 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 FAM86B2P0C5J1 330 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 SHROOM1Q2M3G4 852 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
UBE3B-204ENST00000449510 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 FAM13CQ8NE31 585 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 CKAP2Q8WWK9 683 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 MANSC1Q9H8J5 431 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 DAGLAQ9Y4D2 1042 aa13.1□□□□□ -0.31
UBE3B-204ENST00000449510 ZWINTO95229 277 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 BGNP21810 368 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 PSMA2P25787 234 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 AP2B1P63010 937 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 GGA2Q9UJY4 613 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 A0A1W2PPM1 405 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 MEI4A8MW99 385 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 DKC1O60832 514 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 STAT2P52630 851 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 IYDQ6PHW0 289 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 CRELD2Q6UXH1 353 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 TAS1R2Q8TE23 839 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 H0YGN5 161 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms