RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 SF3A1Q15459 793 aaKnown RBP14.97□□□□□ -0.01
TOM1-211ENST00000449508 VARS2Q5ST30 1063 aaKnown RBP14.97□□□□□ -0.01
TOM1-211ENST00000449508 RTL10Q7L3V2 364 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 HAUS6Q7Z4H7 955 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 GPBP1Q86WP2 473 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 RASSF8Q8NHQ8 419 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 ZNF461Q8TAF7 563 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
TOM1-211ENST00000449508 PDCD11Q14690 1871 aaKnown RBP14.97□□□□□ -0.01
TOM1-211ENST00000449508 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 ANHXE9PGG2 379 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 H7C4K7 107 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 SYN3O14994 580 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 MEFVO15553 781 aaPredicted RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 FAM13AO94988 1023 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 KRT18P05783 430 aaKnown RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 ELF1P32519 619 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 LONP1P36776 959 aaKnown RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 ARPP19P56211 112 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 MCL1Q07820 350 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 HTR4Q13639 388 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 CWF19L1Q69YN2 538 aaKnown RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 MYCT1Q8N699 235 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 RTP3Q9BQQ7 232 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 REEP2Q9BRK0 252 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 HCFC1R1Q9NWW0 138 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 DNMT3BQ9UBC3 853 aaKnown RBP14.96□□□□□ -0.01
TOM1-211ENST00000449508 CDH7Q9ULB5 785 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 CA14Q9ULX7 337 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 NUMBLQ9Y6R0 609 aa14.96□□□□□ -0.01
TOM1-211ENST00000449508 KRBA1A5PL33 1030 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 CLTAP09496 248 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 PLCG1P19174 1290 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 RFX1P22670 979 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 MCM4P33991 863 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 LIG4P49917 911 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 ROR1Q01973 937 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 GRIN1Q05586 938 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 SPAG1Q07617 926 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 MCM6Q14566 821 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 KARSQ15046 597 aaKnown RBP14.95□□□□□ -0.02
TOM1-211ENST00000449508 PABPC1LQ4VXU2 614 aaKnown RBP14.95□□□□□ -0.02
TOM1-211ENST00000449508 SLC8B1Q6J4K2 584 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 PARM1Q6UWI2 310 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 ITFG1Q8TB96 612 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 GPR152Q8TDT2 470 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 LRRC15Q8TF66 581 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 FGF13Q92913 245 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 FGF14Q92915 247 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 RPP25Q9BUL9 199 aaKnown RBP14.95□□□□□ -0.02
TOM1-211ENST00000449508 HAPLN2Q9GZV7 340 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 ZHX3Q9H4I2 956 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 PLEKHA5Q9HAU0 1116 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 BLOC1S4Q9NUP1 217 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 TBX20Q9UMR3 447 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 NOTCH4Q99466 2003 aa14.95□□□□□ -0.02
TOM1-211ENST00000449508 WDR27A2RRH5 827 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 K7ENM7 598 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 PRRG1O14668 218 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 HNRNPDLO14979 420 aaKnown RBP14.94□□□□□ -0.02
TOM1-211ENST00000449508 TRAK2O60296 914 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 ABLIM3O94929 683 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 LRG1P02750 347 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 POU2F2P09086 479 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 CXCL8P10145 99 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 PDCP20941 246 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
TOM1-211ENST00000449508 CUL4AQ13619 759 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 MRPL58Q14197 206 aaKnown RBP14.94□□□□□ -0.02
TOM1-211ENST00000449508 CTXN3Q4LDR2 81 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 RAD54LQ92698 747 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 KIF12Q96FN5 646 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 PARVGQ9HBI0 331 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 TUBGCP4Q9UGJ1 667 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 FBXL5Q9UKA1 691 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 MYH15Q9Y2K3 1946 aa14.94□□□□□ -0.02
TOM1-211ENST00000449508 TTC26A0AVF1 554 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 LACTBL1A8MY62 500 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 ATF2P15336 505 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 PTPN2P17706 415 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 SCP2P22307 547 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 DDIT3P35638 169 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 TNFSF9P41273 254 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 ZNF131P52739 623 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 GPC5P78333 572 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 PPP2R3AQ06190 1150 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 KYAT1Q16773 422 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 MTSS1LQ765P7 747 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 APPL2Q8NEU8 664 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 ING5Q8WYH8 240 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 LARP4BQ92615 738 aaKnown RBP14.93□□□□□ -0.02
TOM1-211ENST00000449508 DDX12PQ92771 950 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 KCNN1Q92952 543 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 CCSER1Q9C0I3 900 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 CYP4F11Q9HBI6 524 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 KCNH3Q9ULD8 1083 aa14.93□□□□□ -0.02
TOM1-211ENST00000449508 MRPS23Q9Y3D9 190 aaKnown RBP14.93□□□□□ -0.02
TOM1-211ENST00000449508 CLIC4Q9Y696 253 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms