RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NELFCDQ8IXH7 590 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 ACER1Q8TDN7 264 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 EPS8L3Q8TE67 593 aaKnown RBP14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SPIRE2Q8WWL2 714 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 PARP14Q460N5 1801 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 PDXKO00764 312 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SREBF1P36956 1147 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 PRKCIP41743 596 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 PHEXP78562 749 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 LRRC41Q15345 812 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 GSTA3Q16772 222 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLC44A4Q53GD3 710 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SEL1L2Q5TEA6 688 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 SPATA24Q86W54 205 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 LBHD1Q9BQE6 289 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 NKRFO15226 690 aaKnown RBP eCLIP14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 CIITAP33076 1130 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 DUS1LQ6P1R4 473 aaKnown RBP14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZNF449Q6P9G9 518 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 OLFML1Q6UWY5 402 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 LRRC74BQ6ZQY2 392 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 GDAP1Q8TB36 358 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 AGAP3Q96P47 875 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 CATSPER2Q96P56 530 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 TRIM51Q9BSJ1 452 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
SYNGAP1-204ENST00000449372 A0A087X0T9 212 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 GTPBP10A4D1E9 387 aaKnown RBP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 RAD21O60216 631 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 PLA2G6O60733 806 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM228BP0C875 321 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 DLGAP5Q15398 846 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 RHOT2Q8IXI1 618 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 ANKRD42Q8N9B4 389 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 SEC14L1Q92503 715 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 NR1H4Q96RI1 486 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 UTRNP46939 3433 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 A6NJR5 290 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 MAP3K7O43318 606 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 YY1P25490 414 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 SERPINB3P29508 390 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 RASSF2P50749 326 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 HPCAP84074 193 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 MPP4Q96JB8 637 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 PCDHA2Q9Y5H9 948 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 BAG6P46379 1132 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 OXCT1P55809 520 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 CXCL9Q07325 125 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 KLC3Q6P597 504 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMEM110Q86TL2 294 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 U2AF1L4Q8WU68 220 aaKnown RBP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 RFFLQ8WZ73 363 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 GOLPH3Q9H4A6 298 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 TTC7AQ9ULT0 858 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 PFASO15067 1338 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 SYNGAP1Q96PV0 1343 aa14.29□□□□□ -0.12
SYNGAP1-204ENST00000449372 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CAPN9O14815 690 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 RASGRF2O14827 1237 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CYP3A4P08684 503 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 MLH1P40692 756 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 ARHGAP4P98171 946 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 OTUD6AQ7L8S5 288 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 RIBC1Q8N443 379 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 NAT14Q8WUY8 206 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TGS1Q96RS0 853 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 KCNK9Q9NPC2 374 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 NAGPAQ9UK23 515 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 PASKQ96RG2 1323 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM86B1E9PN63 330 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 FAM86B2P0C5J1 330 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 VAV1P15498 845 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 MARK3P27448 753 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 ADARP55265 1226 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TGFB2P61812 414 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 DR1Q01658 176 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 SCUBE1Q8IWY4 988 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 LRRC37BQ96QE4 947 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CCDC77Q9BR77 488 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CCDC28BQ9BUN5 200 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms