RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MEIS3P2A8K0S8 358 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 ENPP3O14638 875 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 PTGESO14684 152 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 XPOTO43592 962 aaKnown RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 STAU1O95793 577 aaKnown RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 ASS1P00966 412 aaKnown RBP20.78■□□□□ 0.92
RPS28-202ENST00000449223 ITGB8P26012 769 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 PIK3CAP42336 1068 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 HS1BP3Q53T59 392 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 PHLDB3Q6NSJ2 640 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 CNKSR3Q6P9H4 555 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 FAM81BQ96LP2 452 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 VRTNQ9H8Y1 702 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 RSAD1Q9HA92 442 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
RPS28-202ENST00000449223 LRRN2O75325 713 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 PFKMP08237 780 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 FECHP22830 423 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 HNRNPH3P31942 346 aaKnown RBP20.77■□□□□ 0.92
RPS28-202ENST00000449223 POLR2FP61218 127 aaKnown RBP20.77■□□□□ 0.92
RPS28-202ENST00000449223 APBA1Q02410 837 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 GCNT1Q02742 428 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 TCTN1Q2MV58 587 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 ZNF397Q8NF99 534 aaPredicted RBP20.77■□□□□ 0.92
RPS28-202ENST00000449223 RSPH1Q8WYR4 309 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 TAF4BQ92750 862 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 PANX2Q96RD6 677 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 XYLT2Q9H1B5 865 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 NUCKS1Q9H1E3 243 aaKnown RBP20.77■□□□□ 0.92
RPS28-202ENST00000449223 ABHD10Q9NUJ1 306 aa20.77■□□□□ 0.92
RPS28-202ENST00000449223 TDRD15B5MCY1 1934 aaKnown RBP20.76■□□□□ 0.91
RPS28-202ENST00000449223 ARL5CA6NH57 179 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 PHACTR2O75167 634 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 CST3P01034 146 aaPredicted RBP20.76■□□□□ 0.91
RPS28-202ENST00000449223 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
RPS28-202ENST00000449223 RAG1P15918 1043 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 ATICP31939 592 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 KRT9P35527 623 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 MLH1P40692 756 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 JAM2P57087 298 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 NAB2Q15742 525 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 SGSM1Q2NKQ1 1148 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 LRRC8AQ8IWT6 810 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 BEST2Q8NFU1 509 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 HELQQ8TDG4 1101 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
RPS28-202ENST00000449223 LPPQ93052 612 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 ZFP42Q96MM3 310 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 NT5C1BQ96P26 610 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 IMPG2Q9BZV3 1241 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 SLC38A7Q9NVC3 462 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
RPS28-202ENST00000449223 DPP3Q9NY33 737 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 KLK14Q9P0G3 267 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 PLAGL2Q9UPG8 496 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 FHOD1Q9Y613 1164 aa20.76■□□□□ 0.91
RPS28-202ENST00000449223 ADKP55263 362 aaKnown RBP20.75■□□□□ 0.91
RPS28-202ENST00000449223 WDR44Q5JSH3 913 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 IQCEQ6IPM2 695 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 ENOSF1Q7L5Y1 443 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 CACNA2D4Q7Z3S7 1137 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 TMEM199Q8N511 208 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 OR8K1Q8NGG5 319 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 JAKMIP2Q96AA8 810 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 GAD1Q99259 594 aa20.75■□□□□ 0.91
RPS28-202ENST00000449223 PRDM5Q9NQX1 630 aaPredicted RBP20.75■□□□□ 0.91
RPS28-202ENST00000449223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.74■□□□□ 0.91
RPS28-202ENST00000449223 ANO9A1A5B4 782 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 ITGB3P05106 788 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 LRPAP1P30533 357 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 NOP14P78316 857 aaKnown RBP20.74■□□□□ 0.91
RPS28-202ENST00000449223 TRPC3Q13507 836 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 LRRC52Q8N7C0 313 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 CPLX3Q8WVH0 158 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 ABHD8Q96I13 439 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 RPS6KC1Q96S38 1066 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 STK33Q9BYT3 514 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 TUBGCP4Q9UGJ1 667 aa20.74■□□□□ 0.91
RPS28-202ENST00000449223 OFD1O75665 1012 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 THP07101 528 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 RBP5P82980 135 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 MEA1Q16626 185 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 GLRA4Q5JXX5 417 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 SCARA3Q6AZY7 606 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 PDXDC1Q6P996 788 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 DEFB128Q7Z7B8 93 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 FMNL3Q8IVF7 1028 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 ARHGEF19Q8IW93 802 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 RPUSD2Q8IZ73 545 aaKnown RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 APOBEC3GQ9HC16 384 aaKnown RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 AIPL1Q9NZN9 384 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 DNAJC12Q9UKB3 198 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 ABHD14A-ACY1A0A1B0GW23 586 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 TULP1O00294 542 aaPredicted RBP20.73■□□□□ 0.91
RPS28-202ENST00000449223 PIRO00625 290 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 EFCAB14O75071 495 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 CSF2RAP15509 400 aa20.73■□□□□ 0.91
RPS28-202ENST00000449223 TBXAS1P24557 533 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms