RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 POLIQ9UNA4 740 aa21.48■■□□□ 1.03
VCP-203ENST00000448530 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.48■■□□□ 1.03
VCP-203ENST00000448530 STX6O43752 255 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 MCM4P33991 863 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 PPP2R3AQ06190 1150 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 AXDND1Q5T1B0 1012 aaPredicted RBP21.47■■□□□ 1.03
VCP-203ENST00000448530 USP49Q70CQ1 688 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 GET4Q7L5D6 327 aaPredicted RBP21.47■■□□□ 1.03
VCP-203ENST00000448530 SLC7A14Q8TBB6 771 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 SMOC2Q9H3U7 446 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
VCP-203ENST00000448530 H7C4K7 107 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 SYN3O14994 580 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 OGTO15294 1046 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 XPOTO43592 962 aaKnown RBP21.46■■□□□ 1.03
VCP-203ENST00000448530 PIGRP01833 764 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 FSHRP23945 695 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 HOXA9P31269 272 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 UVSSAQ2YD98 709 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 VARS2Q5ST30 1063 aaKnown RBP21.46■■□□□ 1.03
VCP-203ENST00000448530 KIF12Q96FN5 646 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 CLIC6Q96NY7 704 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 MYADMQ96S97 322 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 MSTO1Q9BUK6 570 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 HAPLN2Q9GZV7 340 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 MFSD1Q9H3U5 465 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 RPF1Q9H9Y2 349 aaKnown RBP21.46■■□□□ 1.03
VCP-203ENST00000448530 EPS15L1Q9UBC2 864 aa21.46■■□□□ 1.03
VCP-203ENST00000448530 CCL16O15467 120 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 MEFVO15553 781 aaPredicted RBP21.45■■□□□ 1.02
VCP-203ENST00000448530 N4BP1O75113 896 aaKnown RBP21.45■■□□□ 1.02
VCP-203ENST00000448530 NMT1P30419 496 aaKnown RBP21.45■■□□□ 1.02
VCP-203ENST00000448530 CCDC73Q6ZRK6 1079 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 SV2BQ7L1I2 683 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 RTL10Q7L3V2 364 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 DYMQ7RTS9 669 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 GRASPQ7Z6J2 395 aaPredicted RBP21.45■■□□□ 1.02
VCP-203ENST00000448530 APPL2Q8NEU8 664 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 NXPE3Q969Y0 559 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 USP28Q96RU2 1077 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 TUBGCP4Q9UGJ1 667 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 FBXL21Q9UKT6 434 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 UBQLN1Q9UMX0 589 aaKnown RBP21.45■■□□□ 1.02
VCP-203ENST00000448530 KMT2EQ8IZD2 1858 aa21.45■■□□□ 1.02
VCP-203ENST00000448530 TTC26A0AVF1 554 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 PDGFBP01127 241 aaPredicted RBP21.44■■□□□ 1.02
VCP-203ENST00000448530 HSP90AA1P07900 732 aaKnown RBP21.44■■□□□ 1.02
VCP-203ENST00000448530 AVPR2P30518 371 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 ELF1P32519 619 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 TNFSF9P41273 254 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 ARPP19P56211 112 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 GTF2BQ00403 316 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 SPAG1Q07617 926 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 SLC39A14Q15043 492 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 RSPO2Q6UXX9 243 aaPredicted RBP21.44■■□□□ 1.02
VCP-203ENST00000448530 MAP4K3Q8IVH8 894 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 FAM212AQ96EL1 285 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 SUSD3Q96L08 255 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 TSPAN18Q96SJ8 248 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 DUSP12Q9UNI6 340 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 ZFP37Q9Y6Q3 630 aaPredicted RBP21.44■■□□□ 1.02
VCP-203ENST00000448530 DOCK8Q8NF50 2099 aa21.44■■□□□ 1.02
VCP-203ENST00000448530 A0A0B4J269 797 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 LAMP2P13473 410 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 STAT6P42226 847 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 VCPP55072 806 aaKnown RBP21.43■■□□□ 1.02
VCP-203ENST00000448530 STK38Q15208 465 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 CTXN3Q4LDR2 81 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 IER5LQ5T953 404 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 SLFN12LQ6IEE8 588 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 SLC8B1Q6J4K2 584 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 HSCBQ8IWL3 235 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 ZNF461Q8TAF7 563 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 DDX12PQ92771 950 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 SNX21Q969T3 373 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 SEL1LQ9UBV2 794 aa21.43■■□□□ 1.02
VCP-203ENST00000448530 MORC2Q9Y6X9 1032 aaPredicted RBP21.43■■□□□ 1.02
VCP-203ENST00000448530 LACTBL1A8MY62 500 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 PRRG1O14668 218 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 GAP43P17677 238 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 CYP3A5P20815 502 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 PTPN5P54829 565 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 ROR1Q01973 937 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 NHLH1Q02575 133 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 ENOX2Q16206 610 aaKnown RBP21.42■■□□□ 1.02
VCP-203ENST00000448530 ZC2HC1CQ53FD0 456 aaPredicted RBP21.42■■□□□ 1.02
VCP-203ENST00000448530 ZNF280DQ6N043 979 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 SFR1Q86XK3 245 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 CD302Q8IX05 232 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 DOCK6Q96HP0 2047 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 ZNF396Q96N95 335 aaPredicted RBP21.42■■□□□ 1.02
VCP-203ENST00000448530 FIZ1Q96SL8 496 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 ST6GALNAC4Q9H4F1 302 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 MRPL44Q9H9J2 332 aaKnown RBP21.42■■□□□ 1.02
VCP-203ENST00000448530 PCDHB8Q9UN66 801 aa21.42■■□□□ 1.02
VCP-203ENST00000448530 MYH15Q9Y2K3 1946 aa21.41■■□□□ 1.02
VCP-203ENST00000448530 LRG1P02750 347 aa21.41■■□□□ 1.02
VCP-203ENST00000448530 POU2F2P09086 479 aa21.41■■□□□ 1.02
VCP-203ENST00000448530 LRPAP1P30533 357 aa21.41■■□□□ 1.02
VCP-203ENST00000448530 NTHL1P78549 312 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms