RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SLC16A3O15427 465 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 TLL1O43897 1013 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 GNA14O95837 355 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 POMCP01189 267 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 THP07101 528 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 EPB41P11171 864 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 SCNN1GP51170 649 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 RABGGTBP53611 331 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 WNT7BP56706 349 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 CLDN10P78369 228 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 MYL5Q02045 173 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 SPAG1Q07617 926 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 NCAPHQ15003 741 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 SURF1Q15526 300 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 TPD52L1Q16890 204 aaPredicted RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 JADE1Q6IE81 842 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 INTS8Q75QN2 995 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 FRMD5Q7Z6J6 570 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF280BQ86YH2 543 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 BRSK2Q8IWQ3 736 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 DHX40Q8IX18 779 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 URGCPQ8TCY9 931 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PLEKHO2Q8TD55 490 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PARD3BQ8TEW8 1205 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 CCDC127Q96BQ5 260 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 LRCH3Q96II8 777 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PPP1R10Q96QC0 940 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 RPS6KC1Q96S38 1066 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 YME1L1Q96TA2 773 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 POP1Q99575 1024 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 RC3H2Q9HBD1 1191 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 METTL14Q9HCE5 456 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 SAMSN1Q9NSI8 373 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 TBC1D13Q9NVG8 400 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 FANCLQ9NW38 375 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PLAGL2Q9UPG8 496 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 DERAQ9Y315 318 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 C2CD2Q9Y426 696 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 NFE2L3Q9Y4A8 694 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 DDHD2O94830 711 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 NFICP08651 508 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 KRT13P13646 458 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 MYOGP15173 224 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 VAMP7P51809 220 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 DLG4P78352 724 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 RNASELQ05823 741 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 ENPEPQ07075 957 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 GRIK3Q13003 919 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 BTG3Q14201 252 aaPredicted RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 TMEM132DQ14C87 1099 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 IQCB1Q15051 598 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 NAB2Q15742 525 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 DUOXA2Q1HG44 320 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 PAN2Q504Q3 1202 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 GLRA4Q5JXX5 417 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 C1orf220Q5T0J3 134 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 PRPF38BQ5VTL8 546 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 AOPEPQ8N6M6 819 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CACTINQ8WUQ7 758 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 C18orf25Q96B23 403 aaPredicted RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM193BQ96PV7 902 aaPredicted RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 FNBP1Q96RU3 617 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 MRPL9Q9BYD2 267 aaKnown RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CWH43Q9H720 699 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 NRDE2Q9H7Z3 1164 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 SLC38A7Q9NVC3 462 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 INTS13Q9NVM9 706 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 ARMCX3Q9UH62 379 aaPredicted RBP8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 PCDHA11Q9Y5I1 949 aa8.17□□□□□ -1.1
AC004540.1-206ENST00000448056 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 LCHNA4D1U4 455 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 LRRIQ3A6PVS8 624 aaPredicted RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 BECN2A8MW95 431 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 B4GALT3O60512 393 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 ALDH2P05091 517 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF18P17022 549 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 TNNI1P19237 187 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 CYP3A5P20815 502 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 GTF2H1P32780 548 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 RPL9P32969 192 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 GCGRP47871 477 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 AP3M2P53677 418 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 DSC1Q08554 894 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 PTPRJQ12913 1337 aa8.16□□□□□ -1.1
AC004540.1-206ENST00000448056 BFSP1Q12934 665 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms