RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 MFSD14AQ96MC6 490 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
LINC00408-201ENST00000447784 PDE11AQ9HCR9 933 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
LINC00408-201ENST00000447784 DERAQ9Y315 318 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 NFE2L3Q9Y4A8 694 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 ARID2Q68CP9 1835 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
LINC00408-201ENST00000447784 LOXHD1Q8IVV2 1947 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TRANK1O15050 2925 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.54□□□□□ -0.4
LINC00408-201ENST00000447784 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 INPPL1O15357 1258 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 NCK2O43639 380 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TNNC2P02585 160 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TPM2P07951 284 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 AP3M2P53677 418 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 SPAG1Q07617 926 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 CAMK1Q14012 370 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 DUOXA2Q1HG44 320 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 XKR4Q5GH76 650 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 JADE1Q6IE81 842 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 ALKAL1Q6UXT8 129 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 LRRC55Q6ZSA7 311 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 COLGALT1Q8NBJ5 622 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 ZSWIM2Q8NEG5 633 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 ANKRD20A12PQ8NF67 263 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 FUCA2Q9BTY2 467 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
LINC00408-201ENST00000447784 THAP9Q9H5L6 903 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 ALG13Q9NP73 1137 aaKnown RBP12.54□□□□□ -0.4
LINC00408-201ENST00000447784 TBC1D13Q9NVG8 400 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
LINC00408-201ENST00000447784 GOLGA6L19H0YKK7 550 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 PTGESO14684 152 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 PHACTR2O75167 634 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ALDH2P05091 517 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ADRB2P07550 413 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 NFICP08651 508 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 PPM1AP35813 382 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 AFF1P51825 1210 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ZNF445P59923 1031 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 PLCB3Q01970 1234 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 BFSP1Q12934 665 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 TUSC3Q13454 348 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 TCERG1LQ5VWI1 586 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 PDE12Q6L8Q7 609 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ZC3H3Q8IXZ2 948 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 AOPEPQ8N6M6 819 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 POF1BQ8WVV4 589 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ANKRD36BP1Q96IX9 119 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 UROC1Q96N76 676 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
LINC00408-201ENST00000447784 LZTS1Q9Y250 596 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 UNC80Q8N2C7 3258 aa12.53□□□□□ -0.4
LINC00408-201ENST00000447784 EVPLQ92817 2033 aa12.52□□□□□ -0.4
LINC00408-201ENST00000447784 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.4
LINC00408-201ENST00000447784 IKBKBO14920 756 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 FGF18O76093 207 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 CLSTN1O94985 981 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 BMP1P13497 986 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 CYP3A5P20815 502 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 DNAJB1P25685 340 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 OR1G1P47890 313 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 TFF2Q03403 129 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 ENPEPQ07075 957 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 BIRC3Q13489 604 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 KCNT2Q6UVM3 1135 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 ZNF280BQ86YH2 543 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 GSTCDQ8NEC7 633 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 PPP2R3CQ969Q6 453 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 PPP1R10Q96QC0 940 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 MED15Q96RN5 788 aa12.52□□□□□ -0.41
LINC00408-201ENST00000447784 POP1Q99575 1024 aaKnown RBP12.52□□□□□ -0.41
LINC00408-201ENST00000447784 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms