RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 ATXN2LQ8WWM7 1075 aaKnown RBP22.28■■□□□ 1.16
PTX4-203ENST00000447419 IPO9Q96P70 1041 aaKnown RBP22.28■■□□□ 1.16
PTX4-203ENST00000447419 RBAKQ9NYW8 714 aaPredicted RBP22.28■■□□□ 1.16
PTX4-203ENST00000447419 HSPBP1Q9NZL4 362 aa22.28■■□□□ 1.16
PTX4-203ENST00000447419 HCFC2Q9Y5Z7 792 aa22.28■■□□□ 1.16
PTX4-203ENST00000447419 PRPF40AO75400 957 aaKnown RBP22.27■■□□□ 1.16
PTX4-203ENST00000447419 EPCAMP16422 314 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 KLRC2P26717 231 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 COL19A1Q14993 1142 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 TMEM132DQ14C87 1099 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 ZBTB6Q15916 424 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 USP41Q3LFD5 358 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 KIAA0319Q5VV43 1072 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 LMBRD2Q68DH5 695 aaPredicted RBP22.27■■□□□ 1.16
PTX4-203ENST00000447419 KANK3Q6NY19 840 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 EFCAB13Q8IY85 973 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.27■■□□□ 1.16
PTX4-203ENST00000447419 UROC1Q96N76 676 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 KLHL5Q96PQ7 755 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 CHST7Q9NS84 486 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 NUB1Q9Y5A7 615 aa22.27■■□□□ 1.16
PTX4-203ENST00000447419 EXTL3O43909 919 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 LILRB3O75022 631 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 MYL1P05976 194 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 SPATA31D3P0C874 917 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 TKTP29401 623 aaKnown RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 DSG1Q02413 1049 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 KNOP1Q1ED39 458 aaKnown RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 SCARA3Q6AZY7 606 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 SPATA31D4Q6ZUB0 917 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 GPD1LQ8N335 351 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 FEZF2Q8TBJ5 459 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 NECAB3Q96P71 396 aaPredicted RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 CDH22Q9UJ99 828 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 UBQLN1Q9UMX0 589 aaKnown RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 TEX28O15482 410 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 ADRB2P07550 413 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 MCM4P33991 863 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 ISM2Q6H9L7 571 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 PALB2Q86YC2 1186 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 C12orf76Q8N812 135 aaPredicted RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 DDX27Q96GQ7 796 aaKnown RBP22.26■■□□□ 1.15
PTX4-203ENST00000447419 TTPALQ9BTX7 342 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 EMILIN2Q9BXX0 1053 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 PDE11AQ9HCR9 933 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 IRAK3Q9Y616 596 aa22.26■■□□□ 1.15
PTX4-203ENST00000447419 NCK2O43639 380 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 RHOBTB3O94955 611 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 IL9P15248 144 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 TFAMQ00059 246 aaKnown RBP22.25■■□□□ 1.15
PTX4-203ENST00000447419 PSMD2Q13200 908 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 BMT2Q1RMZ1 405 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 HS2ST1Q7LGA3 356 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 BRSK2Q8IWQ3 736 aa22.25■■□□□ 1.15
PTX4-203ENST00000447419 CCDC47Q96A33 483 aaKnown RBP22.25■■□□□ 1.15
PTX4-203ENST00000447419 CDCA3Q99618 268 aaPredicted RBP22.25■■□□□ 1.15
PTX4-203ENST00000447419 UBE4BO95155 1302 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 TRIP11Q15643 1979 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 TMEM189-UBE2V1I3L0A0 370 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 ADAM12O43184 909 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 KINO60870 393 aaKnown RBP22.24■■□□□ 1.15
PTX4-203ENST00000447419 RPL9P32969 192 aaKnown RBP22.24■■□□□ 1.15
PTX4-203ENST00000447419 KCNC3Q14003 757 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 LEXMQ3ZCV2 418 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 TJAP1Q5JTD0 557 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 SPATA1Q5VX52 437 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 PTCRAQ6ISU1 281 aaPredicted RBP22.24■■□□□ 1.15
PTX4-203ENST00000447419 BEST2Q8NFU1 509 aa22.24■■□□□ 1.15
PTX4-203ENST00000447419 TIMM13Q9Y5L4 95 aaPredicted RBP22.24■■□□□ 1.15
PTX4-203ENST00000447419 LDHAP00338 332 aaKnown RBP22.23■■□□□ 1.15
PTX4-203ENST00000447419 WEE2P0C1S8 567 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 BMP1P13497 986 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 AAK1Q2M2I8 961 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 LNX1Q8TBB1 728 aaPredicted RBP22.23■■□□□ 1.15
PTX4-203ENST00000447419 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 MSLNLQ96KJ4 702 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 ASB7Q9H672 318 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 DPP3Q9NY33 737 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 STK39Q9UEW8 545 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 CD207Q9UJ71 328 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 PCDHA5Q9Y5H7 936 aa22.23■■□□□ 1.15
PTX4-203ENST00000447419 IL18RAPO95256 599 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 CLCN4P51793 760 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 PSMD5Q16401 504 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 CD302Q8IX05 232 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 SLC22A17Q8WUG5 538 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 KCTD10Q9H3F6 313 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 PTPRJQ12913 1337 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 C5orf42Q9H799 3197 aa22.22■■□□□ 1.15
PTX4-203ENST00000447419 CITO14578 2027 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 GRXCR2A6NFK2 248 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 ZNF233A6NK53 670 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 SPDYE4A6NLX3 237 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 XPOTO43592 962 aaKnown RBP22.21■■□□□ 1.15
PTX4-203ENST00000447419 CYP3A5P20815 502 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 FGFR3P22607 806 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 LRPAP1P30533 357 aa22.21■■□□□ 1.15
PTX4-203ENST00000447419 ELAVL2Q12926 359 aaKnown RBP22.21■■□□□ 1.15
PTX4-203ENST00000447419 SNRNP35Q16560 246 aaKnown RBP22.21■■□□□ 1.15
PTX4-203ENST00000447419 C9orf57Q5W0N0 161 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms