RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PSMC5P62195 406 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 MRPS9P82933 396 aaKnown RBP20.31■□□□□ 0.84
SDCBP-204ENST00000447182 FAM102BQ5T8I3 360 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 CGB2Q6NT52 195 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 CEP128Q6ZU80 1094 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 GDAP1Q8TB36 358 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 AGAP11Q8TF27 550 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 SH2D3AQ9BRG2 576 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 NKIRAS1Q9NYS0 192 aa20.31■□□□□ 0.84
SDCBP-204ENST00000447182 TMEM150BA6NC51 233 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 PSTPIP1O43586 416 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 PROSCO94903 275 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 KRT5P13647 590 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 CCNB1P14635 433 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 RRM1P23921 792 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 CCND1P24385 295 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 MTMR1Q13613 665 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 CRYMQ14894 314 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 AOC3Q16853 763 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 FAM151AQ8WW52 585 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 CLEC4DQ8WXI8 215 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 NTPCRQ9BSD7 190 aaKnown RBP20.3■□□□□ 0.84
SDCBP-204ENST00000447182 MLXIPLQ9NP71 852 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 DNAJC17Q9NVM6 304 aaKnown RBP20.3■□□□□ 0.84
SDCBP-204ENST00000447182 KLHL14Q9P2G3 628 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 C15orf41Q9Y2V0 281 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 PCDHB2Q9Y5E7 798 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 FOXO6A8MYZ6 492 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 TCP10L2B9ZVM9 353 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 IBSPP21815 317 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-204ENST00000447182 CAP2P40123 477 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 SLC8A3P57103 927 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 DMP1Q13316 513 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-204ENST00000447182 TMEM63BQ5T3F8 832 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 SLC39A4Q6P5W5 647 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 ANKRD35Q8N283 1001 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 SPIRE2Q8WWL2 714 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 MIEF2Q96C03 454 aa20.3■□□□□ 0.84
SDCBP-204ENST00000447182 RSRC1Q96IZ7 334 aaKnown RBP20.3■□□□□ 0.84
SDCBP-204ENST00000447182 UMODL1Q5DID0 1318 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 DENND3A2RUS2 1198 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 NFIBO00712 420 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 ANP32DO95626 131 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 CYP1A1P04798 512 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 RALAP11233 206 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 TAC1P20366 129 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 JAK3P52333 1124 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 ZYXQ15942 572 aaKnown RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 XKR9Q5GH70 373 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 ZNF365Q70YC5 407 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 LARGE2Q8N3Y3 721 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 MAB21L3Q8N8X9 362 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 RMDN2Q96LZ7 410 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 NOP53Q9NZM5 478 aaKnown RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 KRT16P08779 473 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 GBP2P32456 591 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 BPIFB4P59827 614 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 MGAT5Q09328 741 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 MON1BQ7L1V2 547 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 SRRM1Q8IYB3 904 aaKnown RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 KATNAL2Q8IYT4 538 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 MAML1Q92585 1016 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 PWWP2AQ96N64 755 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 MOV10L1Q9BXT6 1211 aaKnown RBP20.29■□□□□ 0.84
SDCBP-204ENST00000447182 C17orf75Q9HAS0 396 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 PNMA3Q9UL41 463 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 L3MBTL1Q9Y468 752 aa20.29■□□□□ 0.84
SDCBP-204ENST00000447182 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 KLRC2P26717 231 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 SFNP31947 248 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 NR1H3Q13133 447 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 ZKSCAN8Q15776 578 aaPredicted RBP20.28■□□□□ 0.84
SDCBP-204ENST00000447182 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
SDCBP-204ENST00000447182 IZUMO3Q5VZ72 239 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 SAMD1Q6SPF0 538 aaPredicted RBP20.28■□□□□ 0.84
SDCBP-204ENST00000447182 C15orf39Q6ZRI6 1047 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 RHOT1Q8IXI2 618 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 GPD1LQ8N335 351 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 ZCCHC9Q8N567 271 aaKnown RBP20.28■□□□□ 0.84
SDCBP-204ENST00000447182 NSMCE1Q8WV22 266 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 CPA5Q8WXQ8 436 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 C1orf112Q9NSG2 853 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
SDCBP-204ENST00000447182 TBK1Q9UHD2 729 aa20.28■□□□□ 0.84
SDCBP-204ENST00000447182 MAGEB2O15479 319 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 TBC1D12O60347 775 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 FDX1P10109 184 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 MSH2P43246 934 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 NSFP46459 744 aaKnown RBP20.27■□□□□ 0.84
SDCBP-204ENST00000447182 IL9RQ01113 521 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 MYO1EQ12965 1108 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 STYK1Q6J9G0 422 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 POMGNT1Q8WZA1 660 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 KIFC3Q9BVG8 833 aa20.27■□□□□ 0.84
SDCBP-204ENST00000447182 OSBPL8Q9BZF1 889 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms