RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 SLC39A2Q9NP94 309 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 STK39Q9UEW8 545 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 CDH22Q9UJ99 828 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 TULP1O00294 542 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-204ENST00000446876 WNT7BP56706 349 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 SMAD4Q13485 552 aaKnown RBP16.13■□□□□ 0.17
HDAC4-204ENST00000446876 KANK3Q6NY19 840 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 SYCE2Q6PIF2 218 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 TMEM184AQ6ZMB5 413 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 STXBP4Q6ZWJ1 553 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 NELFCDQ8IXH7 590 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 SMRP1Q8NCR6 262 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 FAM213AQ9BRX8 229 aa16.13■□□□□ 0.17
HDAC4-204ENST00000446876 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 FSD2A1L4K1 749 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 PPEF2O14830 753 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 EIF3DO15371 548 aaKnown RBP eCLIP16.12■□□□□ 0.176e-11■■■□□ 14.9
HDAC4-204ENST00000446876 ZNF202O95125 648 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 ADRB2P07550 413 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 SRGAP2BP0DMP2 458 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 TKTP29401 623 aaKnown RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 CLCN4P51793 760 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 POSTNQ15063 836 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 ZBTB6Q15916 424 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 ARMCX5Q6P1M9 558 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 C12orf76Q8N812 135 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 CASP10Q92851 521 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 DDX27Q96GQ7 796 aaKnown RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 FAM84AQ96KN4 292 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 TMEM206Q9H813 350 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 RXFP1Q9HBX9 757 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 UBQLN1Q9UMX0 589 aaKnown RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 SSX2IPQ9Y2D8 614 aa16.12■□□□□ 0.17
HDAC4-204ENST00000446876 USP15Q9Y4E8 981 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-204ENST00000446876 MTCL1Q9Y4B5 1905 aaKnown RBP16.11■□□□□ 0.17
HDAC4-204ENST00000446876 C2orf16Q68DN1 1984 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 SCN1AP35498 2009 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 GARTP22102 1010 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 TMEM132DQ14C87 1099 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 PSMD5Q16401 504 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 PUS10Q3MIT2 529 aaKnown RBP16.11■□□□□ 0.17
HDAC4-204ENST00000446876 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-204ENST00000446876 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 EFCAB13Q8IY85 973 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 KIAA0895Q8NCT3 520 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 LNX1Q8TBB1 728 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-204ENST00000446876 ZNF507Q8TCN5 953 aa16.11■□□□□ 0.17
HDAC4-204ENST00000446876 GOLGA6L4A6NEF3 574 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 ADAM12O43184 909 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 TGFB1I1O43294 461 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
HDAC4-204ENST00000446876 ADH1AP07327 375 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 WEE2P0C1S8 567 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 SPATA31D3P0C874 917 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 FGFR3P22607 806 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 LRPAP1P30533 357 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 RPL9P32969 192 aaKnown RBP16.1■□□□□ 0.17
HDAC4-204ENST00000446876 MCM4P33991 863 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 DPYDQ12882 1025 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
HDAC4-204ENST00000446876 STK4Q13043 487 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 SMAD2Q15796 467 aaKnown RBP16.1■□□□□ 0.17
HDAC4-204ENST00000446876 RARS2Q5T160 578 aaKnown RBP16.1■□□□□ 0.17
HDAC4-204ENST00000446876 SPATA31D4Q6ZUB0 917 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 CD302Q8IX05 232 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 S1PR5Q9H228 398 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 NUB1Q9Y5A7 615 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 C5orf42Q9H799 3197 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 UBE4BO95155 1302 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 TSC2P49815 1807 aa16.1■□□□□ 0.17
HDAC4-204ENST00000446876 CLIC2O15247 247 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 EXTL3O43909 919 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 CYP3A5P20815 502 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 FMR1NBQ8N0W7 255 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-204ENST00000446876 GPD1LQ8N335 351 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 BEST2Q8NFU1 509 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 CLSTN3Q9BQT9 956 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 MAN1C1Q9NR34 630 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC4-204ENST00000446876 AGPAT3Q9NRZ7 376 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 RBAKQ9NYW8 714 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-204ENST00000446876 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms