RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CFHP08603 1231 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 TNNT3P45378 269 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 AP3M2P53677 418 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ZNF677Q86XU0 584 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 TMEM192Q8IY95 271 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ZNF564Q8TBZ8 553 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 BTBD6Q96KE9 485 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 CALR3Q96L12 384 aaKnown RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 CNTN6Q9UQ52 1028 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 PCDHB4Q9Y5E5 795 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 A0A087WZ62 844 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 H3BRB1 525 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 RAD51CO43502 376 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 CLSTN1O94985 981 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ITGA4P13612 1032 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 TBXAS1P24557 533 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 TNFRSF8P28908 595 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 OAS2P29728 719 aaKnown RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 MAPK4P31152 587 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 MARCKSL1P49006 195 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 MESDQ14696 234 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 CPNE8Q86YQ8 564 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 EFCAB13Q8IY85 973 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 FDXACB1Q9BRP7 624 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 CARD9Q9H257 536 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 TUT1Q9H6E5 874 aaKnown RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 PRDM10Q9NQV6 1147 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ZHX1Q9UKY1 873 aaPredicted RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 TNFSF13BQ9Y275 285 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 COL1A2P08123 1366 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 ESYT3A0FGR9 886 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 VTNP04004 478 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 PHKA2P46019 1235 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 BPIFB4P59827 614 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 MYL6P60660 151 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 AMHR2Q16671 573 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 TMEM132AQ24JP5 1023 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
SMC6-206ENST00000446852 CPA5Q8WXQ8 436 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 KRT35Q92764 455 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 ABHD16BQ9H3Z7 469 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 GDF3Q9NR23 364 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 CPA4Q9UI42 421 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 TTC7AQ9ULT0 858 aaPredicted RBP18.68■□□□□ 0.58
SMC6-206ENST00000446852 AKT3Q9Y243 479 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 KRIT1O00522 736 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 MAGEB2O15479 319 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 FGGP02679 453 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 MMP3P08254 477 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 COMTP21964 271 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 DUOXA2Q1HG44 320 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 UBR7Q8N806 425 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 RNPC3Q96LT9 517 aaKnown RBP18.68■□□□□ 0.58
SMC6-206ENST00000446852 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
SMC6-206ENST00000446852 CNOT8Q9UFF9 292 aaKnown RBP18.68■□□□□ 0.58
SMC6-206ENST00000446852 CENPFP49454 3210 aa18.68■□□□□ 0.58
SMC6-206ENST00000446852 CYP1A1P04798 512 aaPredicted RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 HOXD8P13378 290 aaPredicted RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 TFAMQ00059 246 aaKnown RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 GUCY2DQ02846 1103 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 ZNF211Q13398 564 aaPredicted RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 MTHFD1LQ6UB35 978 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 IMPG2Q9BZV3 1241 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 DDX47Q9H0S4 455 aaKnown RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 EPB41L5Q9HCM4 733 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 UVRAGQ9P2Y5 699 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 GPR25O00155 361 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 CXCL8P10145 99 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 GNA15P30679 374 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 SSTR3P32745 418 aaPredicted RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 CENPCQ03188 943 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 SURF1Q15526 300 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 MARCH8Q5T0T0 291 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 NAA35Q5VZE5 725 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 MCOLN2Q8IZK6 566 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 CD101Q93033 1021 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 CYFIP2Q96F07 1278 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 RPS6KC1Q96S38 1066 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 ZSWIM1Q9BR11 485 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
SMC6-206ENST00000446852 HPCAL4Q9UM19 191 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 NR2E1Q9Y466 385 aa18.67■□□□□ 0.58
SMC6-206ENST00000446852 SLC15A5A6NIM6 579 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 MIF4GDA9UHW6 222 aaKnown RBP18.66■□□□□ 0.58
SMC6-206ENST00000446852 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
SMC6-206ENST00000446852 CARSP49589 748 aaKnown RBP18.66■□□□□ 0.58
SMC6-206ENST00000446852 ZNF132P52740 706 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 HUNKP57058 714 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 FAM187BQ17R55 369 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 C2CD6Q53TS8 623 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 AADACL2Q6P093 401 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 VIPAS39Q9H9C1 493 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 CITO14578 2027 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 IGF2BP3O00425 579 aaKnown RBP eCLIP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms