RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 KAZNQ674X7 775 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 CASC4Q6P4E1 433 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 DARS2Q6PI48 645 aaKnown RBP8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 SPATA24Q86W54 205 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 PYROXD1Q8WU10 500 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 ALKBH8Q96BT7 664 aaKnown RBP8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 USH1CQ9Y6N9 552 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
TNRC6B-205ENST00000446273 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RALAP11233 206 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 PCSK1P29120 753 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 MEI1Q5TIA1 1274 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 IQSEC1Q6DN90 963 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 OR6B2Q6IFH4 312 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 C4orf32Q8N8J7 132 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 UNC45AQ9H3U1 944 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 FBXO28Q9NVF7 368 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 FGFR1OP2Q9NVK5 253 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 ARHGAP20Q9P2F6 1191 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 TBX20Q9UMR3 447 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SLC15A5A6NIM6 579 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RPS6P62753 249 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 EMC2Q15006 297 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 ATP11CQ8NB49 1132 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 TACO1Q9BSH4 297 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 COLEC11Q9BWP8 271 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 EPN3Q9H201 632 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SMG5Q9UPR3 1016 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 EIF3HO15372 352 aaKnown RBP eCLIP8.73□□□□□ -1.014e-7■■■■□ 26.3
TNRC6B-205ENST00000446273 PSTPIP1O43586 416 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 ZBED1O96006 694 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 MDH1P40925 334 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 NAMPTP43490 491 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RAB27AP51159 221 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 CCDC38Q502W7 563 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 CDKL3Q8IVW4 592 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SRRM1Q8IYB3 904 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 APPL2Q8NEU8 664 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 HEXIM2Q96MH2 286 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SENP7Q9BQF6 1050 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RANBP17Q9H2T7 1088 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 PRDM5Q9NQX1 630 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RBM12Q9NTZ6 932 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 KIAA1257Q9ULG3 409 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 SIK3Q9Y2K2 1263 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 STRCQ7RTU9 1775 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 PDHXO00330 501 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 KRT38O76015 456 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 LMNAP02545 664 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 MMEP08473 750 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 VCAM1P19320 739 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 CDR2Q01850 454 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RAD51Q06609 339 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RNF219Q5W0B1 726 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 ACAD10Q6JQN1 1059 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 NLRP14Q86W24 1093 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 CHMP6Q96FZ7 201 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 C11orf70Q9BRQ4 267 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 MTG1Q9BT17 334 aaPredicted RBP8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RUSC1Q9BVN2 902 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 CPA4Q9UI42 421 aa8.73□□□□□ -1.01
TNRC6B-205ENST00000446273 RGPD2P0DJD1 1756 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 ITGA4P13612 1032 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 BMP6P22004 513 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 LIG3P49916 1009 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 SNX1Q13596 522 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 PCBP1Q15365 356 aaKnown RBP eCLIP8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 MTMR14Q8NCE2 650 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 MGARPQ8TDB4 240 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 SH3TC2Q8TF17 1288 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 VCPIP1Q96JH7 1222 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 HTATIP2Q9BUP3 242 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 DDX4Q9NQI0 724 aaKnown RBP8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 A0A087X0T9 212 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 MYO1CO00159 1063 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 CYP26A1O43174 497 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 CDH16O75309 829 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 FAM228BP0C875 321 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 FECHP22830 423 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 ENPEPQ07075 957 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 PTPROQ16827 1216 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 KDM7AQ6ZMT4 941 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 SGSM3Q96HU1 749 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 ALG6Q9Y672 507 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 LTBP3Q9NS15 1303 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 POC1B-GALNT4F8VUJ3 575 aa8.72□□□□□ -1.01
TNRC6B-205ENST00000446273 TTI1O43156 1089 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms