RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 IP6K2Q9UHH9 426 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 RIPK2O43353 540 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 PPARGP37231 505 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 DAB2P98082 770 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 RBM44Q6ZP01 1051 aaKnown RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 TTC13Q8NBP0 860 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 ZFAND2BQ8WV99 257 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 RMND5BQ96G75 393 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 LRRC42Q9Y546 428 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 ZNF318Q5VUA4 2279 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SEC24DO94855 1032 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 SCYL2Q6P3W7 929 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 CALML6Q8TD86 181 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 TEKT2Q9UIF3 430 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ARHGEF37A1IGU5 675 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 CLASP2O75122 1294 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 RTN2O75298 545 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SNRPAP09012 282 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 GYS1P13807 737 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 STAT3P40763 770 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 USH1GQ495M9 461 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 LRRC8EQ6NSJ5 796 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 GABPB2Q8TAK5 448 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 ZNF75CPQ92670 426 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 VPS11Q9H270 941 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 RPS6P62753 249 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 PTK7Q13308 1070 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PARP10Q53GL7 1025 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 THAP1Q9NVV9 213 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 hCG_1984214I3L0E3 225 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 YY1P25490 414 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ZNF713Q8N859 430 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 PYDC1Q8WXC3 89 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 WDR35Q9P2L0 1181 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PLEKHA7Q6IQ23 1121 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 RHOT1Q8IXI2 618 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 E9PMD0 336 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KRR1Q13601 381 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 ATP1A4Q13733 1029 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SLFN13Q68D06 897 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KYQ8NBH2 561 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 TNIP2Q8NFZ5 429 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ARHGAP20Q9P2F6 1191 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 AKR1B1P15121 316 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 VCLP18206 1134 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PBX1P40424 430 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ITGADQ13349 1161 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 LPIN1Q14693 890 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 MARCH10Q8NA82 808 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 TSPAN14Q8NG11 270 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PAIP1Q9H074 479 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 CCPG1Q9ULG6 757 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 INPP5FQ9Y2H2 1132 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KRT7P08729 469 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PAEPP09466 180 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ETS2P15036 469 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PSMC3P17980 439 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 FOLH1Q04609 750 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 BRD8Q9H0E9 1235 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 CNGB3Q9NQW8 809 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ADCY6O43306 1168 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 FMO5P49326 533 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 XIAPP98170 497 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ERVV-2B6SEH9 535 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SLC26A4O43511 780 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 FKBP6O75344 327 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 RAPH1Q70E73 1250 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SLC25A41Q8N5S1 370 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 FAM13CQ8NE31 585 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 RHPN2Q8IUC4 686 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PABPN1LA6NDY0 278 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 SP4Q02446 784 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 BRDTQ58F21 947 aaPredicted RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 IYDQ6PHW0 289 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 FAM71DQ8N9W8 422 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KLC2Q9H0B6 622 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 RRN3Q9NYV6 651 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 SELENONQ9NZV5 590 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 TRIM43BA6NCK2 446 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 TRIM49D1C9J1S8 452 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 CENPCQ03188 943 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 PASD1Q8IV76 773 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ZNF280CQ8ND82 737 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 DEPTORQ8TB45 409 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 ZNF570Q96NI8 536 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
SMG1-202ENST00000446231 ADGRA3Q8IWK6 1321 aa8.28□□□□□ -1.08
SMG1-202ENST00000446231 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.08
SMG1-202ENST00000446231 OASLQ15646 514 aaKnown RBP8.27□□□□□ -1.08
SMG1-202ENST00000446231 WDR59Q6PJI9 974 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms