RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FEM1BQ9UK73 627 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 ARHGEF40Q8TER5 1519 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 VCAM1P19320 739 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 SERPINB9P50453 376 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 NUP107P57740 925 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 MTHFD1LQ6UB35 978 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 ABCA9Q8IUA7 1624 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 PRELPP51888 382 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 HORMAD1Q86X24 394 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 CLEC4FQ8N1N0 589 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 ANKS1AQ92625 1134 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 TRIM9Q9C026 710 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 PABPC3Q9H361 631 aaKnown RBP19.58■□□□□ 0.73
SHANK3-203ENST00000445220 RNF181Q9P0P0 153 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 NLRP11P59045 1033 aaKnown RBP19.58■□□□□ 0.73
SHANK3-203ENST00000445220 CASKIN2Q8WXE0 1202 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 ZNF341Q9BYN7 854 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 RPF1Q9H9Y2 349 aaKnown RBP19.58■□□□□ 0.73
SHANK3-203ENST00000445220 OLA1Q9NTK5 396 aaKnown RBP19.58■□□□□ 0.73
SHANK3-203ENST00000445220 FBXO40Q9UH90 709 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 SUGT1Q9Y2Z0 365 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 E9PCH4 1651 aa19.58■□□□□ 0.73
SHANK3-203ENST00000445220 AIM2O14862 343 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 EXOSC10Q01780 885 aaKnown RBP19.58■□□□□ 0.72
SHANK3-203ENST00000445220 TAP1Q03518 808 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 DNAJC3Q13217 504 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 POTEB3A0JP26 581 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 POTECB2RU33 542 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 CLDN3O15551 220 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 USP11P51784 963 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 NSUN2Q08J23 767 aaKnown RBP eCLIP19.58■□□□□ 0.72
SHANK3-203ENST00000445220 IMPG1Q17R60 797 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 POTEBQ6S5H4 581 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 GPR141Q7Z602 305 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 ADAM33Q9BZ11 813 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 MAGEB5Q9BZ81 275 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 CCSER1Q9C0I3 900 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 ZHX2Q9Y6X8 837 aa19.58■□□□□ 0.72
SHANK3-203ENST00000445220 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 SKAP2O75563 359 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 GNA15P30679 374 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 MAGEA4P43358 317 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 TTC33Q6PID6 262 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 CYFIP1Q7L576 1253 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 METTL23Q86XA0 190 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 FAM167AQ96KS9 214 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 GPR101Q96P66 508 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 PARVAQ9NVD7 372 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 ABCB11O95342 1321 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 ZNF200P98182 395 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 NEDD1Q8NHV4 660 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 SNX19Q92543 992 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 CELF4Q9BZC1 486 aaKnown RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 C20orf96Q9NUD7 363 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 HNRNPRO43390 633 aaKnown RBP19.57■□□□□ 0.72
SHANK3-203ENST00000445220 SDC4P31431 198 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 MIGA2Q7L4E1 593 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 ATG9AQ7Z3C6 839 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 DDIASQ8IXT1 998 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 RCOR2Q8IZ40 523 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 SYNE4Q8N205 404 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 OPTNQ96CV9 577 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 CEP95Q96GE4 821 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 FSD1LQ9BXM9 530 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 HAO1Q9UJM8 370 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 CPA2P48052 419 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 PRUNE1Q86TP1 453 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 MFN1Q8IWA4 741 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 RNF217Q8TC41 542 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 STK33Q9BYT3 514 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 RUBCNLQ9H714 662 aa19.57■□□□□ 0.72
SHANK3-203ENST00000445220 PDXKO00764 312 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 SPAG6O75602 509 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 PYGLP06737 847 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 CLK1P49759 484 aaKnown RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 GIMAP8Q8ND71 665 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 CATSPER2Q96P56 530 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 OSTNP61366 133 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 KRT76Q01546 638 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 RUNX1T1Q06455 604 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 PCYOX1LQ8NBM8 494 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 PHTF1Q9UMS5 762 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 TYW5A2RUC4 315 aaKnown RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 SNAP23O00161 211 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 NEMP1O14524 444 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 WBP4O75554 376 aaKnown RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 SRP72O76094 671 aaKnown RBP19.56■□□□□ 0.72
SHANK3-203ENST00000445220 PRLRP16471 622 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 COPAP53621 1224 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 GRIN1Q05586 938 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 KCNA1Q09470 495 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 PTK7Q13308 1070 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 NLRP9Q7RTR0 991 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 UNC45AQ9H3U1 944 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 SYBUQ9NX95 663 aa19.56■□□□□ 0.72
SHANK3-203ENST00000445220 C15orf41Q9Y2V0 281 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms