RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZIM3Q96PE6 472 aa8.45□□□□□ -1.06
RIF1-205ENST00000444746 NPHS2Q9NP85 383 aa8.45□□□□□ -1.06
RIF1-205ENST00000444746 RAB6BQ9NRW1 208 aa8.45□□□□□ -1.06
RIF1-205ENST00000444746 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
RIF1-205ENST00000444746 SUGT1Q9Y2Z0 365 aa8.45□□□□□ -1.06
RIF1-205ENST00000444746 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 HUNKP57058 714 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 REXO1L1PQ8IX06 675 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 N4BP2L2Q92802 583 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 EXOC4Q96A65 974 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 CCSER1Q9C0I3 900 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 FOXN3O00409 490 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 CAPRIN1Q14444 709 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 PDIA5Q14554 519 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 KCNB1Q14721 858 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 EMBQ6PCB8 327 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 MORC4Q8TE76 937 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TRPV6Q9H1D0 765 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 CACYBPQ9HB71 228 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 E9PCH4 1651 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TARSL2A2RTX5 802 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 CCDC188H7C350 402 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ACTR2P61160 394 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TMEM132DQ14C87 1099 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 SLC18A3Q16572 532 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 NUDCD3Q8IVD9 361 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 EMC1Q8N766 993 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 GIMAP8Q8ND71 665 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 C18orf8Q96DM3 657 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ATP6V1G3Q96LB4 118 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 XPO7Q9UIA9 1087 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 GMNCA6NCL1 334 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 KIF3CO14782 793 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 PFDN6O15212 129 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 SNX2O60749 519 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 COPS2P61201 443 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 APPL2Q8NEU8 664 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 APOL2Q9BQE5 337 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TEX13BQ9BXU2 312 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 MTMR12Q9C0I1 747 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 RNF14Q9UBS8 474 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 LAMC1P11047 1609 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 PODXLO00592 558 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 MAPK13O15264 365 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ITGA8P53708 1063 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 HERVK_113P62684 666 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 KIAA1755Q5JYT7 1200 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 C1orf146Q5VVC0 180 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 LAYNQ6UX15 382 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 IL1RL2Q9HB29 575 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 RGL2O15211 777 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TFDP2Q14188 446 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 XKR3Q5GH77 459 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 MUM1L1Q5H9M0 696 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TATDN2Q93075 761 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ELMO2Q96JJ3 720 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TRIM55Q9BYV6 548 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 PIDD1Q9HB75 910 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 NCOA3Q9Y6Q9 1424 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 ANO9A1A5B4 782 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 SCAMP3O14828 347 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 SERPIND1P05546 499 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TYK2P29597 1187 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 ARFIP2P53365 341 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TPI1P60174 286 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 TAF1BQ53T94 588 aaPredicted RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 HHIPL2Q6UWX4 724 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 DDX53Q86TM3 631 aaKnown RBP8.44□□□□□ -1.06
RIF1-205ENST00000444746 IKZF4Q9H2S9 585 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 PTPRHQ9HD43 1115 aa8.44□□□□□ -1.06
RIF1-205ENST00000444746 A0A087X0T9 212 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 ZSCAN5CA6NGD5 496 aaPredicted RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 MAP3K7O43318 606 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 HAUS5O94927 633 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 ANP32DO95626 131 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 FAM228BP0C875 321 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 RALAP11233 206 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 PPATQ06203 517 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 DCAF6Q58WW2 860 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 URGCPQ8TCY9 931 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 MMTAG2Q9BU76 263 aaKnown RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 GLIS2Q9BZE0 524 aaPredicted RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 C2orf40Q9H1Z8 148 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 ALG6Q9Y672 507 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 MIF4GDA9UHW6 222 aaKnown RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 GCLCP48506 637 aaPredicted RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 MFSD14CQ5VZR4 134 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 RNF219Q5W0B1 726 aaPredicted RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 MOB2Q70IA6 237 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
RIF1-205ENST00000444746 ACOT1Q86TX2 421 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 NETO2Q8NC67 525 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 CASKIN2Q8WXE0 1202 aa8.43□□□□□ -1.06
RIF1-205ENST00000444746 GCNAQ96QF7 691 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms