RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 LRRC43Q8N309 656 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 HIST1H2AHQ96KK5 128 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 HIST1H2AJQ99878 128 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 H2AFJQ9BTM1 129 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 MYH3P11055 1940 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 GPR75-ASB3A0A0A6YYF3 556 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 KCNN4O15554 427 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 ESRRAP11474 423 aaPredicted RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 EEF1B2P24534 225 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 EIF3EP60228 445 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 SOCS4Q8WXH5 440 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 SNF8Q96H20 258 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 HPDLQ96IR7 371 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 STK33Q9BYT3 514 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 VPS11Q9H270 941 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 NDUFS3O75489 264 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 ZSCAN26Q16670 478 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 CDK5RAP1Q96SZ6 601 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 SENP7Q9BQF6 1050 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 TACO1Q9BSH4 297 aaKnown RBP11.83□□□□□ -0.52
FN1-211ENST00000443816 STARD7Q9NQZ5 370 aa11.83□□□□□ -0.52
FN1-211ENST00000443816 GRID2IPA4D2P6 1211 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 RASA4BC9J798 803 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 RASA4O43374 803 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 CHRNA3P32297 505 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 POLD3Q15054 466 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 TRADDQ15628 312 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 KIFC3Q9BVG8 833 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 APEX2Q9UBZ4 518 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 PNPLA6Q8IY17 1366 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 TMEM131LA2VDJ0 1609 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 MYH8P13535 1937 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 LARGE1O95461 756 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 NPTXRO95502 500 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 PLD1Q13393 1074 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 EFHC1Q5JVL4 640 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 SYDE1Q6ZW31 735 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 GPRASP2Q96D09 838 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 POLR3CQ9BUI4 534 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 ALDH1A2O94788 518 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 URODP06132 367 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 PYGBP11216 843 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.522e-8■□□□□ 11.3
FN1-211ENST00000443816 PHKG1Q16816 387 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 KRT35Q92764 455 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 TTC17Q96AE7 1141 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 CFAP99D6REC4 459 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 ZMYND10O75800 440 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 CAP2P40123 477 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 SLC11A2P49281 568 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 C10orf120Q5SQS8 335 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 RRM2BQ7LG56 351 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 SLC7A14Q8TBB6 771 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 AGPAT1Q99943 283 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 STX18Q9P2W9 335 aaKnown RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 E2F6O75461 281 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
FN1-211ENST00000443816 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
FN1-211ENST00000443816 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 AARSP49588 968 aaKnown RBP eCLIP11.81□□□□□ -0.52
FN1-211ENST00000443816 SLC26A2P50443 739 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 CD302Q8IX05 232 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 ZNF609O15014 1411 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 A0A087WWV3 80 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 HMBSP08397 361 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 RGS4P49798 205 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 OOSP2Q86WS3 158 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 C7orf25Q9BPX7 421 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 ABI2Q9NYB9 513 aaPredicted RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 PKP3Q9Y446 797 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 CDH18Q13634 790 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 GLYCTKQ8IVS8 523 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 KIRREL3Q8IZU9 778 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 SEPT8Q92599 483 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 RMDN2Q96LZ7 410 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 CDV3Q9UKY7 258 aaKnown RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 TTC7AQ9ULT0 858 aaPredicted RBP11.81□□□□□ -0.52
FN1-211ENST00000443816 CFLARO15519 480 aa11.81□□□□□ -0.52
FN1-211ENST00000443816 ZW10O43264 779 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms