RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 RPF1Q9H9Y2 349 aaKnown RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 MTRRQ9UBK8 725 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 FBXW11Q9UKB1 542 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 CDY1Q9Y6F8 540 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 MORC2Q9Y6X9 1032 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 SPTLC2O15270 562 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 MCM4P33991 863 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 TNFSF9P41273 254 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 RAB33AQ14088 237 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 MAP4K3Q8IVH8 894 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 SUGP1Q8IWZ8 645 aaKnown RBP21.87■■□□□ 1.09
LRCH3-208ENST00000443727 PDILTQ8N807 584 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 LINC00301Q8NCQ3 95 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 FAM122AQ96E09 287 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 FAM212AQ96EL1 285 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 MRPL44Q9H9J2 332 aaKnown RBP21.87■■□□□ 1.09
LRCH3-208ENST00000443727 TUBGCP4Q9UGJ1 667 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 BACE2Q9Y5Z0 518 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 TRIP11Q15643 1979 aa21.87■■□□□ 1.09
LRCH3-208ENST00000443727 TRIOO75962 3097 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 A0A0B4J269 797 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 MYMKA6NI61 221 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 C8AP07357 584 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 IDEP14735 1019 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 GAP43P17677 238 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 FOXD4L6Q3SYB3 417 aaPredicted RBP21.86■■□□□ 1.09
LRCH3-208ENST00000443727 FOXD4L3Q6VB84 417 aaPredicted RBP21.86■■□□□ 1.09
LRCH3-208ENST00000443727 SPRYD3Q8NCJ5 442 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 FIZ1Q96SL8 496 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 SEL1LQ9UBV2 794 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 POLIQ9UNA4 740 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 ARIH1Q9Y4X5 557 aaPredicted RBP21.86■■□□□ 1.09
LRCH3-208ENST00000443727 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.86■■□□□ 1.09
LRCH3-208ENST00000443727 TECTAO75443 2155 aa21.86■■□□□ 1.09
LRCH3-208ENST00000443727 TTC26A0AVF1 554 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 LACTBL1A8MY62 500 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 H7C4K7 107 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 SYN3O14994 580 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 XPOTO43592 962 aaKnown RBP21.85■■□□□ 1.09
LRCH3-208ENST00000443727 HNRNPA1P09651 372 aaKnown RBP eCLIP21.85■■□□□ 1.09
LRCH3-208ENST00000443727 ENOX2Q16206 610 aaKnown RBP21.85■■□□□ 1.09
LRCH3-208ENST00000443727 VARS2Q5ST30 1063 aaKnown RBP21.85■■□□□ 1.09
LRCH3-208ENST00000443727 ZBTB41Q5SVQ8 909 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 ADALQ6DHV7 355 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 SLFN12LQ6IEE8 588 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 ZNF720Q7Z2F6 126 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 BMP8AQ7Z5Y6 402 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 SLC7A14Q8TBB6 771 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 HVCN1Q96D96 273 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 ST6GALNAC4Q9H4F1 302 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 TBC1D7Q9P0N9 293 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 UBQLN1Q9UMX0 589 aaKnown RBP21.85■■□□□ 1.09
LRCH3-208ENST00000443727 CITO14578 2027 aa21.85■■□□□ 1.09
LRCH3-208ENST00000443727 XYLBO75191 536 aa21.84■■□□□ 1.09
LRCH3-208ENST00000443727 ZSCAN22P10073 491 aaPredicted RBP21.84■■□□□ 1.09
LRCH3-208ENST00000443727 ARPP19P56211 112 aa21.84■■□□□ 1.09
LRCH3-208ENST00000443727 AXDND1Q5T1B0 1012 aaPredicted RBP21.84■■□□□ 1.09
LRCH3-208ENST00000443727 SLC39A4Q6P5W5 647 aa21.84■■□□□ 1.09
LRCH3-208ENST00000443727 RSPO2Q6UXX9 243 aaPredicted RBP21.84■■□□□ 1.09
LRCH3-208ENST00000443727 GET4Q7L5D6 327 aaPredicted RBP21.84■■□□□ 1.09
LRCH3-208ENST00000443727 APPL2Q8NEU8 664 aa21.84■■□□□ 1.09
LRCH3-208ENST00000443727 EXOC7Q9UPT5 735 aa21.84■■□□□ 1.09
LRCH3-208ENST00000443727 ANKRD63C9JTQ0 380 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 TULP1O00294 542 aaPredicted RBP21.83■■□□□ 1.09
LRCH3-208ENST00000443727 CCL16O15467 120 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 PPP6R2O75170 966 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 YEATS4O95619 227 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 CYP3A5P20815 502 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 UVSSAQ2YD98 709 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 GRASPQ7Z6J2 395 aaPredicted RBP21.83■■□□□ 1.09
LRCH3-208ENST00000443727 CD302Q8IX05 232 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 FBXL6Q8N531 539 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 DNAJC19Q96DA6 116 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 ASIC4Q96FT7 647 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 SUSD3Q96L08 255 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 TSPAN18Q96SJ8 248 aa21.83■■□□□ 1.09
LRCH3-208ENST00000443727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.83■■□□□ 1.09
LRCH3-208ENST00000443727 C2orf16Q68DN1 1984 aa21.83■■□□□ 1.08
LRCH3-208ENST00000443727 A0A087X0B3 334 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 FAM189A1O60320 539 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 GCNT3O95395 438 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 PAPLNO95428 1278 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 FSHRP23945 695 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 HOXA9P31269 272 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 ELF1P32519 619 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 PLA2G5P39877 138 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 ACOT2P49753 483 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 CTXN3Q4LDR2 81 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 BEST2Q8NFU1 509 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 POMGNT1Q8WZA1 660 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 ACCSQ96QU6 501 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 MYADMQ96S97 322 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 LRRC27Q9C0I9 530 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 SMOC2Q9H3U7 446 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 KCNK12Q9HB15 430 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 PANK4Q9NVE7 773 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 IGSF9Q9P2J2 1179 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 CPSF3Q9UKF6 684 aaKnown RBP21.82■■□□□ 1.08
LRCH3-208ENST00000443727 AGO2Q9UKV8 859 aaKnown RBP21.82■■□□□ 1.08
LRCH3-208ENST00000443727 PCDHB13Q9Y5F0 798 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms