RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 KIAA0319LQ8IZA0 1049 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SLC35F6Q8N357 371 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PPM1KQ8N3J5 372 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 UBL4BQ8N7F7 174 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 UBR7Q8N806 425 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NIPA2Q8N8Q9 360 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 LRRC57Q8N9N7 239 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 C1orf131Q8NDD1 294 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ACRBPQ8NEB7 543 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 KLHDC9Q8NEP7 349 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 OR6J1Q8NGC5 347 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TPCN2Q8NHX9 752 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NPLOC4Q8TAT6 608 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ASAP3Q8TDY4 903 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 BSNDQ8WZ55 320 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 DDX1Q92499 740 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SEC14L1Q92503 715 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF516Q92618 1163 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SLCO2A1Q92959 643 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TMEM143Q96AN5 459 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 HES6Q96HZ4 224 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CEP295NLQ96MC4 621 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ACAP3Q96P50 834 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 WDR24Q96S15 920 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FAM213AQ9BRX8 229 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TCHPQ9BT92 498 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CCDC94Q9BW85 323 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TARS2Q9BW92 718 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 OXCT2Q9BYC2 517 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 FRMD8P1Q9BZ68 369 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 UBXN6Q9BZV1 441 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 LACRTQ9GZZ8 138 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 TSPYL1Q9H0U9 437 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PDCL3Q9H2J4 239 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 ADAMTS10Q9H324 1103 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RNPEPQ9H4A4 650 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SLITRK6Q9H5Y7 841 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 VIPAS39Q9H9C1 493 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 RPF1Q9H9Y2 349 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GPBP1L1Q9HC44 474 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 UBE2TQ9NPD8 197 aaPredicted RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NLRC4Q9NPP4 1024 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 LZTFL1Q9NQ48 299 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GPRC5CQ9NQ84 441 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SLC38A7Q9NVC3 462 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GDAP2Q9NXN4 497 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 PKD2L1Q9P0L9 805 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CNTN3Q9P232 1028 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GTF2IRD1Q9UHL9 959 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 NOCTQ9UK39 431 aaKnown RBP3.03□□□□□ -1.92
LINC00393-201ENST00000443621 AMFRQ9UKV5 643 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 GUCA1BQ9UMX6 200 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 STXBP5LQ9Y2K9 1186 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.03□□□□□ -1.922e-15■■■■■ 91.4
LINC00393-201ENST00000443621 CEP83Q9Y592 693 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 CITO14578 2027 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 EVPLQ92817 2033 aa3.03□□□□□ -1.92
LINC00393-201ENST00000443621 C17orf102A2RUQ5 167 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 BHMG1C9JSJ3 638 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 INO80B-WBP1J3KQ70 363 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 M0QZ92 97 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 SMAPO00193 183 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 KIF3CO14782 793 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 GPR182O15218 404 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 RRP9O43818 475 aaKnown RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 TSPAN1O60635 241 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 PHACTR2O75167 634 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 ADAMTS4O75173 837 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 VNN1O95497 513 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 EOMESO95936 686 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 FTLP02792 175 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 GLI1P08151 1106 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 PLEKP08567 350 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 TMEM191BP0C7N4 346 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 TRIM49P0CI25 452 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 TRIM49CP0CI26 452 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 SRGAP2CP0DJJ0 459 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 VDRP11473 427 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 CYP2C9P11712 490 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 DESP17661 470 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 ARF4P18085 180 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 MMP8P22894 467 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 CTNNA2P26232 953 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 LRPAP1P30533 357 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 HOXA11P31270 313 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 RPL9P32969 192 aaKnown RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 PTPN7P35236 360 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 CETN2P41208 172 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 PIK3CAP42336 1068 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 NSFP46459 744 aaKnown RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 GABRB2P47870 512 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 RPL34P49207 117 aaKnown RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 PSEN2P49810 448 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 KLK7P49862 253 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 APLP1P51693 650 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 ZNF135P52742 658 aaPredicted RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 GALCP54803 685 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 NLRP11P59045 1033 aaKnown RBP3.02□□□□□ -1.93
LINC00393-201ENST00000443621 TNNC1P63316 161 aa3.02□□□□□ -1.93
LINC00393-201ENST00000443621 NOP14P78316 857 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms