RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 UBA3Q8TBC4 463 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 MCEEQ96PE7 176 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 NKIRAS1Q9NYS0 192 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 GOLGA8KD6RF30 607 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 CSPG5O95196 566 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 TERF2Q15554 542 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 PORCNQ9H237 461 aa11.28□□□□□ -0.6
CALD1-210ENST00000443197 MAGED2Q9UNF1 606 aaPredicted RBP11.28□□□□□ -0.6
CALD1-210ENST00000443197 SHANK3Q9BYB0 1731 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 RAP1GAPP47736 663 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 DGKDQ16760 1214 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 SYCP2LQ5T4T6 812 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 RSRC2Q7L4I2 434 aaKnown RBP11.27□□□□□ -0.6
CALD1-210ENST00000443197 OR2W6PQ8NHA6 318 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 WHAMMQ8TF30 809 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.6
CALD1-210ENST00000443197 HEY1Q9Y5J3 304 aa11.27□□□□□ -0.6
CALD1-210ENST00000443197 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 MAGEB2O15479 319 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 KRT14P02533 472 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 ITGA4P13612 1032 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 CDR2Q01850 454 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 TMEM132DQ14C87 1099 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 TAF12Q16514 161 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 SMTNL2Q2TAL5 461 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 COBLL1Q53SF7 1204 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 PALM2Q8IXS6 379 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 DAW1Q8N136 415 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 LRRC4Q9HBW1 653 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 PRMT7Q9NVM4 692 aaPredicted RBP11.27□□□□□ -0.61
CALD1-210ENST00000443197 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.61
CALD1-210ENST00000443197 MYH1P12882 1939 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 A6NJR5 290 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 KCNA2P16389 499 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 HSPA6P17066 643 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 ARPP19P56211 112 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 FSTL1Q12841 308 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 IRF2BP2Q7Z5L9 587 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 NOP9Q86U38 636 aaKnown RBP11.27□□□□□ -0.61
CALD1-210ENST00000443197 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 SH2D3CQ8N5H7 860 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 REPS2Q8NFH8 660 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 OSMRQ99650 979 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 WNT8AQ9H1J5 351 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
CALD1-210ENST00000443197 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 ADCY3O60266 1144 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 GJB6O95452 261 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 NPTXRO95502 500 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 KRT3P12035 628 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 CYP2C19P33261 490 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 CDH8P55286 799 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 SNRPFP62306 86 aaKnown RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 CEP120Q8N960 986 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 TXNDC16Q9P2K2 825 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 TNRC6CQ9HCJ0 1690 aaKnown RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 CALB1P05937 261 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 TNFSF9P41273 254 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 NIF3L1Q9GZT8 377 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 SALL4Q9UJQ4 1053 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 PDE4DIPQ5VU43 2346 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 F5H423 210 aaPredicted RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 RNASELQ05823 741 aaKnown RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 CUL1Q13616 776 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
CALD1-210ENST00000443197 ABHD15Q6UXT9 468 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 MAP7D3Q8IWC1 876 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 RHOT1Q8IXI2 618 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 FUT8Q9BYC5 575 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 TTYH3Q9C0H2 523 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 PARVAQ9NVD7 372 aa11.26□□□□□ -0.61
CALD1-210ENST00000443197 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
CALD1-210ENST00000443197 HUS1O60921 280 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 MAPTP10636 758 aaKnown RBP11.25□□□□□ -0.61
CALD1-210ENST00000443197 CCT5P48643 541 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 PPIL2Q13356 520 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 PDCLQ13371 301 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 BMT2Q1RMZ1 405 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 MEI1Q5TIA1 1274 aa11.25□□□□□ -0.61
CALD1-210ENST00000443197 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms