RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SNX3O60493 162 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 AGTP01019 485 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 NPTX2P47972 431 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 DNAJC3Q13217 504 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 FITM2Q8N6M3 262 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 HELQQ8TDG4 1101 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 KLHL29Q96CT2 875 aa13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 ZBTB45Q96K62 511 aaPredicted RBP13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 RANBP17Q9H2T7 1088 aaKnown RBP13.99□□□□□ -0.17
SLC48A1-201ENST00000442218 GOLGA8RI6L899 631 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ATF2P15336 505 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 NRLP54845 237 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 MFAP3P55082 362 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 TKFCQ3LXA3 575 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 C11orf63Q6NUN7 778 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ZNF449Q6P9G9 518 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 PIGWQ7Z7B1 504 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 MTMR14Q8NCE2 650 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 PARD3BQ8TEW8 1205 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 NT5C1BQ96P26 610 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 WNT8AQ9H1J5 351 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 RAB20Q9NX57 234 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 HERC5Q9UII4 1024 aaKnown RBP13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ADGRA3Q8IWK6 1321 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 PIK3CDO00329 1044 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 EZRP15311 586 aaKnown RBP13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ELF1P32519 619 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 GAD2Q05329 585 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 FSTL1Q12841 308 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 DRP2Q13474 957 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ANKMY2Q8IV38 441 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 NSMCE1Q8WV22 266 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 CLEC4DQ8WXI8 215 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 NINJ2Q9NZG7 142 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ANKFY1Q9P2R3 1169 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 UMODL1Q5DID0 1318 aa13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 ATXN2Q99700 1313 aaKnown RBP13.98□□□□□ -0.17
SLC48A1-201ENST00000442218 COL2A1P02458 1487 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 NCALDP61601 193 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 PLCB3Q01970 1234 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 XRCC4Q13426 336 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 NEDD9Q14511 834 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 KRT39Q6A163 491 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 CHURC1Q8WUH1 139 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 PSPC1Q8WXF1 523 aaKnown RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 FAM167BQ9BTA0 163 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 SLC24A3Q9HC58 644 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 KMT5AQ9NQR1 393 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 PGAP2Q9UHJ9 254 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 NAALADL1Q9UQQ1 740 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 MROH7Q68CQ1 1323 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 ANXA13P27216 316 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 GMPSP49915 693 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 MGAT5Q09328 741 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 TMEM270Q6UE05 265 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 MCM8Q9UJA3 840 aa13.97□□□□□ -0.17
SLC48A1-201ENST00000442218 RASA4BC9J798 803 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 H0Y3Z8 333 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 RASA4O43374 803 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 FOXN2P32314 431 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 GSCP56915 257 aaPredicted RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 NOP14P78316 857 aaKnown RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 CDR2Q01850 454 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 P3H1Q32P28 736 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 TXNRD3NBQ6F5E7 133 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 ZNF365Q70YC5 407 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 FBXL13Q8NEE6 735 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 SHC3Q92529 594 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 TMEM206Q9H813 350 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 SAYSD1Q9NPB0 183 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 GEMIN8Q9NWZ8 242 aaKnown RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 USP15Q9Y4E8 981 aaPredicted RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 PAX7P23759 505 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 RPL7AP62424 266 aaKnown RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 IZUMO3Q5VZ72 239 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 ANO5Q75V66 913 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 ERICH1Q86X53 443 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 LRRN4Q8WUT4 740 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 GABBR1Q9UBS5 961 aa13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
SLC48A1-201ENST00000442218 PTPRJQ12913 1337 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms