RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 ITGA11Q9UKX5 1188 aa13.47□□□□□ -0.25
ERGIC3-208ENST00000442139 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
ERGIC3-208ENST00000442139 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 CAVIN2O95810 425 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 BMP6P22004 513 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 GTF2H1P32780 548 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 MCCD1P59942 119 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 CLDN10P78369 228 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 STX1AQ16623 288 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 GLRA4Q5JXX5 417 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 ANKRD40Q6AI12 368 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 FAM114A1Q8IWE2 563 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 FAM186BQ8IYM0 893 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 TLR9Q9NR96 1032 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 INTS13Q9NVM9 706 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 MTUS1Q9ULD2 1270 aa13.46□□□□□ -0.25
ERGIC3-208ENST00000442139 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 PODXLO00592 558 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 NCK2O43639 380 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 B3GAT3O94766 335 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 C1RP00736 705 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 ITGB1P05556 798 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 TNNI1P19237 187 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 RBP5P82980 135 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 TFAMQ00059 246 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 ISM2Q6H9L7 571 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 CAVIN1Q6NZI2 390 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 FRMD5Q7Z6J6 570 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 SPPL3Q8TCT6 385 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 PARD3BQ8TEW8 1205 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 CGRRF1Q99675 332 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 PDE11AQ9HCR9 933 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 MTMR10Q9NXD2 777 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 NUB1Q9Y5A7 615 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
ERGIC3-208ENST00000442139 PRRC2BQ5JSZ5 2229 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 SYN3O14994 580 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 SOD2P04179 222 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 URODP06132 367 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 NFICP08651 508 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CTSAP10619 480 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CLCNKBP51801 687 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 VAMP7P51809 220 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 BFSP1Q12934 665 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 GRIN2CQ14957 1233 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 SV2CQ496J9 727 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 C9orf57Q5W0N0 161 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 APPL2Q8NEU8 664 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 POF1BQ8WVV4 589 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 HERC2P3Q9BVR0 1158 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 PRDM12Q9H4Q4 367 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 CERS4Q9HA82 394 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 ARMCX3Q9UH62 379 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 DSEQ9UL01 958 aa13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-208ENST00000442139 TSC2P49815 1807 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 MYO7AQ13402 2215 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 ANO9A1A5B4 782 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 PIRO00625 290 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 MEFVO15553 781 aaPredicted RBP13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 N4BP1O75113 896 aaKnown RBP13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 AKAP3O75969 853 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 EFEMP2O95967 443 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 ATICP31939 592 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 GLUD2P49448 558 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 AARSP49588 968 aaKnown RBP eCLIP13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 TAF6P49848 677 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 DPCR1Q3MIW9 517 aa13.43□□□□□ -0.26
ERGIC3-208ENST00000442139 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms