RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZNF394Q53GI3 561 aa14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 TDRD10Q5VZ19 366 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 NUGGCQ68CJ6 796 aa14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 TCP11Q8WWU5 503 aa14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 ZKSCAN4Q969J2 545 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 POLR3FQ9H1D9 316 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 ANKEF1Q9NU02 776 aa14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 COL4A5P29400 1685 aa14.44□□□□□ -0.1
HERPUD1-204ENST00000439977 MAPK13O15264 365 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 ZBED4O75132 1171 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 RGS20O76081 388 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 ZSCAN5DPP0CG00 497 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 MTM1Q13496 603 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 WDR44Q5JSH3 913 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM182AQ5T1J6 154 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 ARMC9Q7Z3E5 817 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 TBC1D1Q86TI0 1168 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM83AQ86UY5 434 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 HAUS1Q96CS2 278 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 DDX27Q96GQ7 796 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PLVAPQ9BX97 442 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 DCLK3Q9C098 648 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 MYOZ2Q9NPC6 264 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 GSTTP1A0A1W2PQM5 241 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 VWA5AO00534 786 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 SFNP31947 248 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PSMC4P43686 418 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PRKCEQ02156 737 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 BRDTQ58F21 947 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 SNRNP48Q6IEG0 339 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 TAOK1Q7L7X3 1001 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PIGWQ7Z7B1 504 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PNMA8AQ86V59 439 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM228AQ86W67 206 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PARP9Q8IXQ6 854 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 SRRM1Q8IYB3 904 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 GLIS1Q8NBF1 620 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNF526Q8TF50 670 aaPredicted RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 TBC1D31Q96DN5 1066 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 SNF8Q96H20 258 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 FBXL18Q96ME1 805 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PAIP2Q9BPZ3 127 aaKnown RBP14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 HAPLN2Q9GZV7 340 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 ADAM22Q9P0K1 906 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 PCDHB4Q9Y5E5 795 aa14.43□□□□□ -0.1
HERPUD1-204ENST00000439977 LRRIQ4A6NIV6 560 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 CLTAP09496 248 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 GBP1P32455 592 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 SAMD7Q7Z3H4 446 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 VSIG10LQ86VR7 867 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 NIM1KQ8IY84 436 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TAB3Q8N5C8 712 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TMC2Q8TDI7 906 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 RUNDC3BQ96NL0 473 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 APOBEC3GQ9HC16 384 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 COL2A1P02458 1487 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 PMM2O15305 246 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 PIAS1O75925 651 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TTC4O95801 387 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 GAS8O95995 478 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ETS1P14921 441 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 BRAFP15056 766 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 DPEP1P16444 411 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 RPL7AP62424 266 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 DRP2Q13474 957 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNF365Q70YC5 407 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 C12orf50Q8NA57 414 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 LPAR1Q92633 364 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNRF3Q9ULT6 936 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 AGAP1Q9UPQ3 857 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 BRWD3Q6RI45 1802 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ATF7P17544 494 aaPredicted RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ITIH2P19823 946 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 GCNT1Q02742 428 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 RHBDF2Q6PJF5 856 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TRMT10CQ7L0Y3 403 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TRPM8Q7Z2W7 1104 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TMEM174Q8WUU8 243 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM212AQ96EL1 285 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 SGSM3Q96HU1 749 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 IFT74Q96LB3 600 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 NTPCRQ9BSD7 190 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 TARS2Q9BW92 718 aaKnown RBP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 CYP26B1Q9NR63 512 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 NINJ2Q9NZG7 142 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 WHRNQ9P202 907 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 BAIAP2L1Q9UHR4 511 aa14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERPUD1-204ENST00000439977 ZNF541Q9H0D2 1346 aa14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 TLR3O15455 904 aaKnown RBP14.41□□□□□ -0.1
HERPUD1-204ENST00000439977 STBD1O95210 358 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms