RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
UBE2F-213ENST00000439780 UBQLN1Q9UMX0 589 aaKnown RBP11.37□□□□□ -0.59
UBE2F-213ENST00000439780 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
UBE2F-213ENST00000439780 SPTBN5Q9NRC6 3674 aaKnown RBP11.37□□□□□ -0.59
UBE2F-213ENST00000439780 UNC80Q8N2C7 3258 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 TMEM189-UBE2V1I3L0A0 370 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 C2CD2LO14523 706 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 CLASP2O75122 1294 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 GLP2RO95838 553 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 CYP3A5P20815 502 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 BMP6P22004 513 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 DSG1Q02413 1049 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 KCNC3Q14003 757 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 TMEM132DQ14C87 1099 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 RTP2Q5QGT7 225 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 ISM2Q6H9L7 571 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 PRSS55Q6UWB4 352 aaPredicted RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 HS2ST1Q7LGA3 356 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 EFHBQ8N7U6 833 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 RDH13Q8NBN7 331 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 SMARCE1Q969G3 411 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 CCDC34Q96HJ3 373 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 GSDMAQ96QA5 445 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
UBE2F-213ENST00000439780 MAN1B1Q9UKM7 699 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 DERAQ9Y315 318 aa11.36□□□□□ -0.59
UBE2F-213ENST00000439780 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■■■ 96.1
UBE2F-213ENST00000439780 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 A0A0C4DFX4 3053 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 ANO9A1A5B4 782 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 PDXKO00764 312 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 TBX10O75333 385 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 IL18RAPO95256 599 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 SMC2O95347 1197 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CNPP09543 421 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 RPL17P18621 184 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 FGFR3P22607 806 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 TKTP29401 623 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CA8P35219 290 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 PRCPP42785 496 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 GLUD2P49448 558 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CASP4P49662 377 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 SNRNP35Q16560 246 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CAMK4Q16566 473 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 USP41Q3LFD5 358 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 ZCWPW2Q504Y3 356 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 ZNF658Q5TYW1 1059 aaPredicted RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 LMBRD2Q68DH5 695 aaPredicted RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 BEST2Q8NFU1 509 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 PLEKHO2Q8TD55 490 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 HLA-CQ95604 372 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 PABPC5Q96DU9 382 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 KLHL5Q96PQ7 755 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 TSPAN18Q96SJ8 248 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 UBE2ZQ9H832 354 aaPredicted RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 MRPL17Q9NRX2 175 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 RMND1Q9NWS8 449 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CLEC1BQ9P126 229 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 CGNQ9P2M7 1197 aaKnown RBP11.35□□□□□ -0.59
UBE2F-213ENST00000439780 TRAF3IP3Q9Y228 551 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
UBE2F-213ENST00000439780 H3BQ06 376 aaPredicted RBP11.34□□□□□ -0.59
UBE2F-213ENST00000439780 BIN1O00499 593 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 PIRO00625 290 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 SPTLC1O15269 473 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 TEX28O15482 410 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 NR3C1P04150 777 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 URODP06132 367 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
UBE2F-213ENST00000439780 KCNA5P22460 613 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 TFAMQ00059 246 aaKnown RBP11.34□□□□□ -0.59
UBE2F-213ENST00000439780 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 C9orf57Q5W0N0 161 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 LLGL2Q6P1M3 1020 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
UBE2F-213ENST00000439780 EP400NLQ6ZTU2 488 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 CEP57Q86XR8 500 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 SLC9A9Q8IVB4 645 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 C1orf127Q8N9H9 656 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 OR5B17Q8NGF7 314 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
UBE2F-213ENST00000439780 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
UBE2F-213ENST00000439780 TMEM174Q8WUU8 243 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms