RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 TSPAN18Q96SJ8 248 aa21.13■□□□□ 0.97
SEMA3B-206ENST00000439487 MAN1B1Q9UKM7 699 aa21.13■□□□□ 0.97
SEMA3B-206ENST00000439487 C2orf71A6NGG8 1288 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 ZNF233A6NK53 670 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 TMEM189-UBE2V1I3L0A0 370 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 PDXKO00764 312 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 PER2O15055 1255 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 XPOTO43592 962 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 CYP3A5P20815 502 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 RPL9P32969 192 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 NRIP1P48552 1158 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 BMS1Q14692 1282 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 SPATA1Q5VX52 437 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 EFCAB13Q8IY85 973 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 MRPL43Q8N983 215 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 BEST2Q8NFU1 509 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 B3GALT6Q96L58 329 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 FBXL18Q96ME1 805 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 TLE6Q9H808 572 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 KIAA1586Q9HCI6 787 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 PDE11AQ9HCR9 933 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 STK39Q9UEW8 545 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 DERAQ9Y315 318 aa21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 MTCL1Q9Y4B5 1905 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-206ENST00000439487 SF3B1O75533 1304 aaKnown RBP eCLIP21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 C2CD2LO14523 706 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 LRPAP1P30533 357 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 PRCPP42785 496 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 BRCC3P46736 316 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 PPP2R3CQ969Q6 453 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 C2CD2Q9Y426 696 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 PLXNA3P51805 1871 aa21.11■□□□□ 0.97
SEMA3B-206ENST00000439487 GOLGA6L22H0YM25 854 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 I3L4J1 428 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 BIN1O00499 593 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 CALUO43852 315 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 EXOC3O60645 756 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 NR3C1P04150 777 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 GLUD2P49448 558 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 SNRNP35Q16560 246 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 USP41Q3LFD5 358 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 FAM171A1Q5VUB5 890 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 FAM84AQ96KN4 292 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 MRPL17Q9NRX2 175 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 CHST7Q9NS84 486 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 DMAC2Q9NW81 257 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 TRAF3IP3Q9Y228 551 aa21.1■□□□□ 0.97
SEMA3B-206ENST00000439487 PPEF2O14830 753 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 LINC01565O15544 149 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 LILRB3O75022 631 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 URODP06132 367 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 DSG1Q02413 1049 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 DUSP6Q16828 381 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 KIAA0319Q5VV43 1072 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 KIAA1841Q6NSI8 718 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 EP400NLQ6ZTU2 488 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 CEP57Q86XR8 500 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 SLC9A9Q8IVB4 645 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 CLSTN2Q9H4D0 955 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 DPP3Q9NY33 737 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 NUB1Q9Y5A7 615 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 IRAK3Q9Y616 596 aa21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 SPTBN5Q9NRC6 3674 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-206ENST00000439487 TFAMQ00059 246 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 CYP24A1Q07973 514 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 ELAVL2Q12926 359 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 COBLL1Q53SF7 1204 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 RTP2Q5QGT7 225 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 C9orf57Q5W0N0 161 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 LMBRD2Q68DH5 695 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 NT5DC4Q86YG4 428 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 RIN2Q8WYP3 895 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 GTPBP4Q9BZE4 634 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 CLDND1Q9NY35 253 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.97
SEMA3B-206ENST00000439487 TCF20Q9UGU0 1960 aaKnown RBP21.08■□□□□ 0.96
SEMA3B-206ENST00000439487 TRAPPC3O43617 180 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 CLASP2O75122 1294 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 BMP6P22004 513 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 MCM4P33991 863 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 CASP4P49662 377 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 RBM10P98175 930 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 ADAM15Q13444 863 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 MORC3Q14149 939 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 SURF1Q15526 300 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 ADSSL1Q8N142 457 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 EFHBQ8N7U6 833 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 GPT2Q8TD30 523 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 TMEM174Q8WUU8 243 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 HLA-CQ95604 372 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 PABPC5Q96DU9 382 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 KLHL5Q96PQ7 755 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 CDCA3Q99618 268 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 TTPALQ9BTX7 342 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 SSX2IPQ9Y2D8 614 aa21.07■□□□□ 0.96
SEMA3B-206ENST00000439487 PTPRJQ12913 1337 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms