RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 POMGNT1Q8WZA1 660 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 SAAL1Q96ER3 474 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 LRRC27Q9C0I9 530 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 PCIF1Q9H4Z3 704 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 PLEKHA5Q9HAU0 1116 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 SLC39A2Q9NP94 309 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 MRPL17Q9NRX2 175 aaKnown RBP14.45□□□□□ -0.1
LINC00399-201ENST00000439008 C2orf16Q68DN1 1984 aa14.45□□□□□ -0.1
LINC00399-201ENST00000439008 PVALEFA0A1B0GWK0 134 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 NR1I2O75469 434 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 ZNF202O95125 648 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 FGFR3P22607 806 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 TKTP29401 623 aaKnown RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 ABCD1P33897 745 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 STK4Q13043 487 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 USP41Q3LFD5 358 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 KRBA2Q6ZNG9 492 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 GLYCTKQ8IVS8 523 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 NELFCDQ8IXH7 590 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 EFCAB13Q8IY85 973 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 CEP57L1Q8IYX8 460 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 FMR1NBQ8N0W7 255 aaPredicted RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 KIAA0895Q8NCT3 520 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 ENGASEQ8NFI3 743 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 LNX1Q8TBB1 728 aaPredicted RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 KHSRPQ92945 711 aaKnown RBP eCLIP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
LINC00399-201ENST00000439008 UHRF1Q96T88 793 aaPredicted RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 RPF1Q9H9Y2 349 aaKnown RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 USP15Q9Y4E8 981 aaPredicted RBP14.44□□□□□ -0.1
LINC00399-201ENST00000439008 SF3B1O75533 1304 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC00399-201ENST00000439008 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
LINC00399-201ENST00000439008 WEE2P0C1S8 567 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SPATA31D3P0C874 917 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 LRPAP1P30533 357 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 PPP2R3AQ06190 1150 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 DPYDQ12882 1025 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SMAD4Q13485 552 aaKnown RBP14.43□□□□□ -0.1
LINC00399-201ENST00000439008 ALCAMQ13740 583 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SMAD2Q15796 467 aaKnown RBP14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SLFN12LQ6IEE8 588 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SPATA31D4Q6ZUB0 917 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 CEP57Q86XR8 500 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SYCP3Q8IZU3 236 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SUSD6Q92537 303 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 UROC1Q96N76 676 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 CLSTN3Q9BQT9 956 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 FAM213AQ9BRX8 229 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 TTPALQ9BTX7 342 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
LINC00399-201ENST00000439008 SPTLC1O15269 473 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 EIF3DO15371 548 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC00399-201ENST00000439008 GARTP22102 1010 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 KLRC2P26717 231 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 RPL9P32969 192 aaKnown RBP14.42□□□□□ -0.1
LINC00399-201ENST00000439008 KYAT1Q16773 422 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 SPATA1Q5VX52 437 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 KIAA1841Q6NSI8 718 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 LILRA6Q6PI73 481 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 PALB2Q86YC2 1186 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 CASP10Q92851 521 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 DDX27Q96GQ7 796 aaKnown RBP14.42□□□□□ -0.1
LINC00399-201ENST00000439008 PYM1Q9BRP8 204 aaKnown RBP14.42□□□□□ -0.1
LINC00399-201ENST00000439008 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 USP25Q9UHP3 1055 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 CIZ1Q9ULV3 898 aaPredicted RBP14.42□□□□□ -0.1
LINC00399-201ENST00000439008 EXOC7Q9UPT5 735 aa14.42□□□□□ -0.1
LINC00399-201ENST00000439008 PTPRJQ12913 1337 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 ANO9A1A5B4 782 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 CLIC2O15247 247 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 TGM5O43548 720 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 TBC1D4O60343 1298 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 RPN1P04843 607 aaKnown RBP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 AARSP49588 968 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 ZP2Q05996 745 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 POSTNQ15063 836 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 PSMD5Q16401 504 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 RARS2Q5T160 578 aaKnown RBP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 CBWD2Q8IUF1 395 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 BRSK2Q8IWQ3 736 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 GPR65Q8IYL9 337 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 EMILIN2Q9BXX0 1053 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 TMEM206Q9H813 350 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 PDE11AQ9HCR9 933 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 AGPAT3Q9NRZ7 376 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 FNIP2Q9P278 1114 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 UBQLN1Q9UMX0 589 aaKnown RBP14.41□□□□□ -0.1
LINC00399-201ENST00000439008 TSC2P49815 1807 aa14.41□□□□□ -0.1
LINC00399-201ENST00000439008 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 EXTL3O43909 919 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 RFPL2O75678 378 aa14.4□□□□□ -0.1
LINC00399-201ENST00000439008 CYP3A5P20815 502 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms