RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 CREBRFQ8IUR6 639 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 MTMR12Q9C0I1 747 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 DPP3Q9NY33 737 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 PLAGL2Q9UPG8 496 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 NLRC5Q86WI3 1866 aa19.88■□□□□ 0.77
HDAC6-208ENST00000438518 PTPRJQ12913 1337 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 TMEM189-UBE2V1I3L0A0 370 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 PNPLA4P41247 253 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 SMAD3P84022 425 aaKnown RBP19.87■□□□□ 0.77
HDAC6-208ENST00000438518 PAN2Q504Q3 1202 aaKnown RBP19.87■□□□□ 0.77
HDAC6-208ENST00000438518 C1orf220Q5T0J3 134 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 C15orf39Q6ZRI6 1047 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 TRAPPC11Q7Z392 1133 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 COLGALT2Q8IYK4 626 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
HDAC6-208ENST00000438518 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 SAMD11Q96NU1 681 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 CXCL16Q9H2A7 254 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 CWH43Q9H720 699 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 NRDE2Q9H7Z3 1164 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 STK39Q9UEW8 545 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 TUBGCP4Q9UGJ1 667 aa19.87■□□□□ 0.77
HDAC6-208ENST00000438518 DDHD2O94830 711 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 C4BPAP04003 597 aaKnown RBP19.86■□□□□ 0.77
HDAC6-208ENST00000438518 ALDH2P05091 517 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 TRIM49P0CI25 452 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 TRIM49CP0CI26 452 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 FMO5P49326 533 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 ALDH7A1P49419 539 aaKnown RBP19.86■□□□□ 0.77
HDAC6-208ENST00000438518 KCNH2Q12809 1159 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 VWA3BQ502W6 1294 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 SV2AQ7L0J3 742 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 LRRC52Q8N7C0 313 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 C1orf127Q8N9H9 656 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 OR5B17Q8NGF7 314 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 POP1Q99575 1024 aaKnown RBP19.86■□□□□ 0.77
HDAC6-208ENST00000438518 MSRAQ9UJ68 235 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 COQ4Q9Y3A0 265 aa19.86■□□□□ 0.77
HDAC6-208ENST00000438518 ANO9A1A5B4 782 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 GTPBP10A4D1E9 387 aaKnown RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 TULP1O00294 542 aaPredicted RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 ZC3H11AO75152 810 aaKnown RBP eCLIP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 PHACTR2O75167 634 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 STAU1O95793 577 aaKnown RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 ATICP31939 592 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 PPM1AP35813 382 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 RBP5P82980 135 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 SOX4Q06945 474 aaPredicted RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 PPP3CAQ08209 521 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 BIRC3Q13489 604 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 KRT31Q15323 416 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 UPP1Q16831 310 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 LRIT3Q3SXY7 679 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 FILIP1LQ4L180 1135 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 HSP90AA4PQ58FG1 418 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 DCLRE1AQ6PJP8 1040 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 ZNF280BQ86YH2 543 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 ZNF516Q92618 1163 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 TAF4BQ92750 862 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 C18orf25Q96B23 403 aaPredicted RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 ZNF558Q96NG5 402 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 COLEC11Q9BWP8 271 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 IMPG2Q9BZV3 1241 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 NDST4Q9H3R1 872 aa19.85■□□□□ 0.77
HDAC6-208ENST00000438518 MRPL42Q9Y6G3 142 aaKnown RBP19.85■□□□□ 0.77
HDAC6-208ENST00000438518 PODXLO00592 558 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 PIRO00625 290 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 ITGB3P05106 788 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 GCLMP48507 274 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 CLCNKBP51801 687 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 MYL7Q01449 175 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 MYO1EQ12965 1108 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 TRPC3Q13507 836 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 TDRD10Q5VZ19 366 aaKnown RBP19.84■□□□□ 0.77
HDAC6-208ENST00000438518 C9orf57Q5W0N0 161 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 LMBRD2Q68DH5 695 aaPredicted RBP19.84■□□□□ 0.77
HDAC6-208ENST00000438518 CCDC150Q8NCX0 1101 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 RNF214Q8ND24 703 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 FBXL13Q8NEE6 735 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 FAXDC2Q96IV6 333 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 PLVAPQ9BX97 442 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 FAN1Q9Y2M0 1017 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 PCDHB12Q9Y5F1 795 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 CEP290O15078 2479 aa19.84■□□□□ 0.77
HDAC6-208ENST00000438518 ARHGEF37A1IGU5 675 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 CASTOR2A6NHX0 329 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 NRP1O14786 923 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 GALTP07902 379 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 ATP1A3P13637 1013 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 OR1G1P47890 313 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 COPB1P53618 953 aaKnown RBP19.83■□□□□ 0.77
HDAC6-208ENST00000438518 BCAR1P56945 870 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 SGSM1Q2NKQ1 1148 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 MIIPQ5JXC2 388 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 FAM109BQ6ICB4 259 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-208ENST00000438518 KCNT2Q6UVM3 1135 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 CXorf38Q8TB03 319 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 PBX4Q9BYU1 374 aa19.83■□□□□ 0.77
HDAC6-208ENST00000438518 VRTNQ9H8Y1 702 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms