RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 BACE2Q9Y5Z0 518 aa15.51■□□□□ 0.07
LINC01088-201ENST00000437737 CHD6Q8TD26 2715 aa15.51■□□□□ 0.07
LINC01088-201ENST00000437737 GREB1Q4ZG55 1949 aa15.51■□□□□ 0.07
LINC01088-201ENST00000437737 CFAP47Q6ZTR5 3102 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 ZNF197O14709 1029 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 TRAPPC3O43617 180 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 USO1O60763 962 aaKnown RBP15.5■□□□□ 0.07
LINC01088-201ENST00000437737 PSMC3P17980 439 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 CCNE1P24864 410 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 CNR2P34972 360 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 RARRES1P49788 294 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 AASDHQ4L235 1098 aaPredicted RBP15.5■□□□□ 0.07
LINC01088-201ENST00000437737 GLRA4Q5JXX5 417 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 PRSS36Q5K4E3 855 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 HEATR6Q6AI08 1181 aaKnown RBP15.5■□□□□ 0.07
LINC01088-201ENST00000437737 CPLX2Q6PUV4 134 aaKnown RBP15.5■□□□□ 0.07
LINC01088-201ENST00000437737 PIK3AP1Q6ZUJ8 805 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 CEP68Q76N32 757 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 MAP4K3Q8IVH8 894 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 ASB16Q96NS5 453 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 GDAQ9Y2T3 454 aa15.5■□□□□ 0.07
LINC01088-201ENST00000437737 ARHGEF37A1IGU5 675 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 I3L4J1 428 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 ZNF263O14978 683 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 LYPLA2O95372 231 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 HSP90AA1P07900 732 aaKnown RBP15.49■□□□□ 0.07
LINC01088-201ENST00000437737 CHRNB1P11230 501 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 LIG1P18858 919 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 PMLP29590 882 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 CLCNKBP51801 687 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 ARPP19P56211 112 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 EVCP57679 992 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 ROR1Q01973 937 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 PRPF4BQ13523 1007 aaKnown RBP15.49■□□□□ 0.07
LINC01088-201ENST00000437737 LRRC32Q14392 662 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 N4BP2L1Q5TBK1 243 aaPredicted RBP15.49■□□□□ 0.07
LINC01088-201ENST00000437737 CYP4A22Q5TCH4 519 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 VITQ6UXI7 678 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 SPEM1Q8N4L4 309 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 ZNF461Q8TAF7 563 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 DEPDC1BQ8WUY9 529 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 CYP4F11Q9HBI6 524 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 GPRC5CQ9NQ84 441 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 TRPV5Q9NQA5 729 aa15.49■□□□□ 0.07
LINC01088-201ENST00000437737 WDR27A2RRH5 827 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 TTLL13PA6NNM8 815 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 NRG2O14511 850 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-201ENST00000437737 IGFBP6P24592 240 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-201ENST00000437737 BRCC3P46736 316 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 GAS6Q14393 721 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 FAM187BQ17R55 369 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 IQCEQ6IPM2 695 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 ELMOD1Q8N336 334 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 FAM160A2Q8N612 972 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-201ENST00000437737 C12orf50Q8NA57 414 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-201ENST00000437737 CSGALNACT1Q8TDX6 532 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 PIGOQ8TEQ8 1089 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 SMARCD2Q92925 531 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 FZD8Q9H461 694 aa15.48■□□□□ 0.07
LINC01088-201ENST00000437737 CNOT1A5YKK6 2376 aaKnown RBP15.47■□□□□ 0.07
LINC01088-201ENST00000437737 A0A087WWV3 80 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 MICAL2O94851 1124 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 PRKCBP05771 671 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 XBP1P17861 261 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 VIPR2P41587 438 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 CCR2P41597 374 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 STK3Q13188 491 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 PTGDRQ13258 359 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 TOB2Q14106 344 aaPredicted RBP15.47■□□□□ 0.07
LINC01088-201ENST00000437737 MAPK6Q16659 721 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 CDCA2Q69YH5 1023 aaPredicted RBP15.47■□□□□ 0.07
LINC01088-201ENST00000437737 SLC8B1Q6J4K2 584 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 YAF2Q8IY57 180 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
LINC01088-201ENST00000437737 UROC1Q96N76 676 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 HSD17B14Q9BPX1 270 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 C2orf40Q9H1Z8 148 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 GOLGA2P5Q9HBQ8 144 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
LINC01088-201ENST00000437737 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 USP20Q9Y2K6 914 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 INSL5Q9Y5Q6 135 aa15.47■□□□□ 0.07
LINC01088-201ENST00000437737 K7ESF4 209 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 ABLIM3O94929 683 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 CD2BP2O95400 341 aaKnown RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 MYL4P12829 197 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 ATF2P15336 505 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 KPNA1P52294 538 aaPredicted RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 SF3A2Q15428 464 aaKnown RBP15.46■□□□□ 0.07
LINC01088-201ENST00000437737 UPP1Q16831 310 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 DCAF4L1Q3SXM0 396 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 C1orf228Q6PIY5 440 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 CD300LGQ6UXG3 332 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 HS6ST3Q8IZP7 471 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 C3orf58Q8NDZ4 430 aa15.46■□□□□ 0.07
LINC01088-201ENST00000437737 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms