RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 TMTC3Q6ZXV5 915 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 PLA2G4DQ86XP0 818 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 WFDC8Q8IUA0 241 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 ZNF713Q8N859 430 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 AUTS2Q8WXX7 1259 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 NRBP2Q9NSY0 501 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 EPS15L1Q9UBC2 864 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 PCDHA10Q9Y5I2 948 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 SLC12A7Q9Y666 1083 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 TAF6LQ9Y6J9 622 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 R4GN57 208 aa9.47□□□□□ -0.89
NIF3L1-208ENST00000436412 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SH2B2O14492 632 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 PRC1O43663 620 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 ZNF623O75123 536 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 C1RP00736 705 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 GALTP07902 379 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 CYP3A4P08684 503 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SP9P0CG40 484 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SRFP11831 508 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 KLRC2P26717 231 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 RAB27AP51159 221 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 GPC3P51654 580 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 CLCN4P51793 760 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 NAPAP54920 295 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SETQ01105 290 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 NOMO2Q5JPE7 1267 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 WWC2Q6AWC2 1192 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 TMEM173Q86WV6 379 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 C1orf210Q8IVY1 113 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 CCDC82Q8N4S0 544 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 MAP4K1Q92918 833 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SCLT1Q96NL6 688 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 NSUN5Q96P11 429 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 KLHL5Q96PQ7 755 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 TBC1D17Q9HA65 648 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 WDR6Q9NNW5 1121 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 SIT1Q9Y3P8 196 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.9
NIF3L1-208ENST00000436412 PKD1L2Q7Z442 2459 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 IGLV3-22A0A075B6J6 115 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 FAM86B1E9PN63 330 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 NARSO43776 548 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 CNPP09543 421 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 FAM86B2P0C5J1 330 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 SFPQP23246 707 aaKnown RBP eCLIP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 CHMLP26374 656 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 RNASELQ05823 741 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 ZNF528Q3MIS6 628 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 SLC44A3Q8N4M1 653 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 SUMF1Q8NBK3 374 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 ZNF577Q9BSK1 485 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 GCOM2Q9BZD3 368 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 INO80BQ9C086 356 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 MRPL17Q9NRX2 175 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 TBC1D13Q9NVG8 400 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 RBM28Q9NW13 759 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 DLGAP2Q9P1A6 1054 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 KANSL3Q9P2N6 904 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 GABBR1Q9UBS5 961 aa9.45□□□□□ -0.9
NIF3L1-208ENST00000436412 WDR81Q562E7 1941 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SMCO2A6NFE2 343 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 WDR64B1ANS9 1081 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SGSM2O43147 1006 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 KINO60870 393 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 N4BP1O75113 896 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 PAPLNO95428 1278 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 ALDH2P05091 517 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 H2AFB1P0C5Y9 115 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 H2AFB2P0C5Z0 115 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 RXRAP19793 462 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 DNM2P50570 870 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 TTC22Q5TAA0 569 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 TWF2Q6IBS0 349 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 TRMT1LQ7Z2T5 733 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 HDAC7Q8WUI4 952 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 BCL7CQ8WUZ0 217 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 CRYGNQ8WXF5 182 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 RIN2Q8WYP3 895 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 PGBD4Q96DM1 585 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SHDQ96IW2 340 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 PGBD1Q96JS3 809 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 TMEM175Q9BSA9 504 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 VN1R3Q9BXE9 311 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 ARHGEF3Q9NR81 526 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SLC2A4RGQ9NR83 387 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 STIM2Q9P246 746 aa9.44□□□□□ -0.9
NIF3L1-208ENST00000436412 SEPT3Q9UH03 358 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms