RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SYNCQ9H7C4 482 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 NUB1Q9Y5A7 615 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 GRAP2O75791 330 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 RARAP10276 462 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 MYL6P60660 151 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 RPL7AP62424 266 aaKnown RBP16.61■□□□□ 0.25
SCARF1-203ENST00000434376 ANKRD42Q8N9B4 389 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 IMPG2Q9BZV3 1241 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
SCARF1-203ENST00000434376 TJP2Q9UDY2 1190 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 SLC29A2Q14542 456 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 NAA25Q14CX7 972 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 PRELID2Q8N945 189 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 MTMR14Q8NCE2 650 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 FAM49AQ9H0Q0 323 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 SLC24A3Q9HC58 644 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 SLC40A1Q9NP59 571 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 PCSK1NQ9UHG2 260 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 ABHD15Q6UXT9 468 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 HERPUD2Q9BSE4 406 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 ZWILCHQ9H900 591 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 ANKEF1Q9NU02 776 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 VTNP04004 478 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 RPL21P46778 160 aaKnown RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 NCOA4Q13772 614 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 SWT1Q5T5J6 900 aaKnown RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 C1orf131Q8NDD1 294 aaKnown RBP16.6■□□□□ 0.25
SCARF1-203ENST00000434376 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 CPB2Q96IY4 423 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 SPATC1LQ9H0A9 340 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
SCARF1-203ENST00000434376 SOWAHBA6NEL2 793 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 F5H423 210 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 CAND2O75155 1236 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 GTF2H1P32780 548 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 ADCY8P40145 1251 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 ALDH5A1P51649 535 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 KIF22Q14807 665 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 EMC1Q8N766 993 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 OLIG1Q8TAK6 271 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 ACTRT1Q8TDG2 376 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 SLC16A10Q8TF71 515 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 RNF14Q9UBS8 474 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 AKT3Q9Y243 479 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 R3HDM2Q9Y2K5 976 aaKnown RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 ZNF286BP0CG31 522 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 CAPSQ13938 189 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 RHOT2Q8IXI1 618 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 RBBP8NLQ8NC74 664 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 EPS8L3Q8TE67 593 aaKnown RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 C9orf72Q96LT7 481 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-203ENST00000434376 KCNK9Q9NPC2 374 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
SCARF1-203ENST00000434376 CHUKO15111 745 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 ZSCAN5DPP0CG00 497 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 TXNP10599 105 aaKnown RBP16.58■□□□□ 0.25
SCARF1-203ENST00000434376 RALAP11233 206 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 CLNS1AP54105 237 aaKnown RBP16.58■□□□□ 0.25
SCARF1-203ENST00000434376 CDR2Q01850 454 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 CDO1Q16878 200 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 LONRF1Q17RB8 773 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.25
SCARF1-203ENST00000434376 PORCNQ9H237 461 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.25
SCARF1-203ENST00000434376 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.24
SCARF1-203ENST00000434376 TLR3O15455 904 aaKnown RBP16.58■□□□□ 0.24
SCARF1-203ENST00000434376 KCTD2Q14681 263 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 AMHR2Q16671 573 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 QPCTQ16769 361 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 EEF1DP3Q658K8 133 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 IQCKQ8N0W5 287 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 SHC3Q92529 594 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 STRA6Q9BX79 667 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 FOCADQ5VW36 1801 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 ETS1P14921 441 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 IFI35P80217 286 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-203ENST00000434376 SKOR1P84550 965 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 WDR72Q3MJ13 1102 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 ZNF568Q3ZCX4 644 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 KDM7AQ6ZMT4 941 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 USP37Q86T82 979 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 CTNNAL1Q9UBT7 734 aa16.58■□□□□ 0.24
SCARF1-203ENST00000434376 POLR2AP24928 1970 aaKnown RBP16.58■□□□□ 0.24
SCARF1-203ENST00000434376 PLA2G6O60733 806 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms