RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MFAP3P55082 362 aa13.02□□□□□ -0.32
SEMA3F-206ENST00000434342 DUPD1Q68J44 220 aa13.02□□□□□ -0.32
SEMA3F-206ENST00000434342 CEP170P1Q96L14 293 aa13.02□□□□□ -0.32
SEMA3F-206ENST00000434342 WDR35Q9P2L0 1181 aa13.02□□□□□ -0.32
SEMA3F-206ENST00000434342 DIS3Q9Y2L1 958 aaKnown RBP13.02□□□□□ -0.32
SEMA3F-206ENST00000434342 ASTN2O75129 1339 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 DNAJC8O75937 253 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 CHRNB2P17787 502 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 ALDH3A1P30838 453 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 PMS2P54278 862 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 DMP1Q13316 513 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 SLC29A2Q14542 456 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 DENND2CQ68D51 928 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 ATL2Q8NHH9 583 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 GMLQ99445 158 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 TBC1D22BQ9NU19 505 aa13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-206ENST00000434342 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 HNRNPDLO14979 420 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 CCNE2O96020 404 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 FGFR4P22455 802 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 RFX1P22670 979 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 NPTX2P47972 431 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PSMC5P62195 406 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 KRT39Q6A163 491 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 SEMA4AQ9H3S1 761 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 TRIM33Q9UPN9 1127 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 UBIAD1Q9Y5Z9 338 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 SSTR3P32745 418 aaPredicted RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 GTF2BQ00403 316 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 TTC27Q6P3X3 843 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 RNF207Q6ZRF8 634 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 SYNGAP1Q96PV0 1343 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 CYP11B1P15538 503 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 RPL21P46778 160 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PDE6CP51160 858 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 RNASELQ05823 741 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 CCDC15Q0P6D6 951 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 MTMR2Q13614 643 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 ALCAMQ13740 583 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PGM5Q15124 567 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 PCNX4Q63HM2 1172 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 TMEM110Q86TL2 294 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 NLRX1Q86UT6 975 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 FGD4Q96M96 766 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 DNAJC17Q9NVM6 304 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 DBR1Q9UK59 544 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
SEMA3F-206ENST00000434342 WDR64B1ANS9 1081 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 PHF2O75151 1096 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 EIF4BP23588 611 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 FMO1Q01740 532 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 BAATQ14032 418 aaPredicted RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 TRIP13Q15645 432 aaPredicted RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 CRELD2Q6UXH1 353 aaPredicted RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 NDNQ99608 321 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 FAM213AQ9BRX8 229 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 IQCGQ9H095 443 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 GABBR1Q9UBS5 961 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 EXOC7Q9UPT5 735 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 FAM187AA6NFU0 413 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 CLDN3O15551 220 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 TRAPPC3O43617 180 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 VPS41P49754 854 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 CXCL9Q07325 125 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 ANO5Q75V66 913 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 SEC14L1Q92503 715 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 IWS1Q96ST2 819 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 ELAC2Q9BQ52 826 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 NOCTQ9UK39 431 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 SMAPO00193 183 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 P4HA2O15460 535 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 EGFRP00533 1210 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 CHRNA3P32297 505 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 GJC1P36383 396 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 SESN3P58005 492 aa13□□□□□ -0.33
SEMA3F-206ENST00000434342 DHX34Q14147 1143 aaKnown RBP13□□□□□ -0.33
SEMA3F-206ENST00000434342 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms