RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 NCDNQ9UBB6 729 aa7.22□□□□□ -1.25
HDAC9-213ENST00000433709 IGSF1Q8N6C5 1336 aa7.22□□□□□ -1.25
HDAC9-213ENST00000433709 BTAF1O14981 1849 aa7.22□□□□□ -1.25
HDAC9-213ENST00000433709 NPC1L1Q9UHC9 1359 aa7.21□□□□□ -1.25
HDAC9-213ENST00000433709 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 A0A1W2PRX2 142 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 UBE2QL1A1L167 161 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 GABRDO14764 452 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 ZNF623O75123 536 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 TMEM127O75204 238 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 RAD17O75943 681 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 MTHFD2P13995 350 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 PHKG2P15735 406 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 YY1P25490 414 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
HDAC9-213ENST00000433709 MTNR1BP49286 362 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 GRM7Q14831 915 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 ABHD15Q6UXT9 468 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 Q8TCH9 128 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 CFAP53Q96M91 514 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 C8orf49Q96NF6 230 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 SLC2A13Q96QE2 648 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 SYT17Q9BSW7 474 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 NELFAQ9H3P2 528 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 CD248Q9HCU0 757 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 IL23AQ9NPF7 189 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 HOMER2Q9NSB8 354 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 SMPD4Q9NXE4 827 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 PLA2G3Q9NZ20 509 aa7.21□□□□□ -1.26
HDAC9-213ENST00000433709 CNOT11Q9UKZ1 510 aaKnown RBP7.21□□□□□ -1.26
HDAC9-213ENST00000433709 PRAMEF4O60810 478 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 LTA4HP09960 611 aaKnown RBP7.2□□□□□ -1.26
HDAC9-213ENST00000433709 MYBL2P10244 700 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 MTHFSP49914 203 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 ANAPC15P60006 121 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 FOXL1Q12952 345 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 CLUL1Q15846 466 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 BRDTQ58F21 947 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-213ENST00000433709 AMOTL1Q8IY63 956 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 C1orf162Q8NEQ5 155 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-213ENST00000433709 PIGBQ92521 554 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 RCAN3Q9UKA8 241 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 GPR45Q9Y5Y3 372 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 ANKRD26Q9UPS8 1709 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 PNPLA7Q6ZV29 1317 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 CASZ1Q86V15 1759 aa7.2□□□□□ -1.26
HDAC9-213ENST00000433709 TRIM75PA6NK02 468 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 B8ZZF3 427 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 MTSS1O43312 755 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 CTSSP25774 331 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 MSX2P35548 267 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 EFEMP1Q12805 493 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 ADRM1Q16186 407 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 GPR162Q16538 588 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 ZNF530Q6P9A1 599 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 CMTM4Q8IZR5 234 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 GLB1L3Q8NCI6 653 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 CHST13Q8NET6 341 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 FAXDC2Q96IV6 333 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 SMAD5Q99717 465 aaKnown RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 ACE2Q9BYF1 805 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 ASPSCR1Q9BZE9 553 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 TLR9Q9NR96 1032 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 NUDCQ9Y266 331 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 SLC30A1Q9Y6M5 507 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 KAT6BQ8WYB5 2073 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 MAP2P11137 1827 aaKnown RBP7.19□□□□□ -1.26
HDAC9-213ENST00000433709 KIF7Q2M1P5 1343 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 PAPPAQ13219 1627 aa7.19□□□□□ -1.26
HDAC9-213ENST00000433709 QSER1Q2KHR3 1735 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 PKD1L3Q7Z443 1732 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 DOT1LQ8TEK3 1739 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 AGXTP21549 392 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 CASRP41180 1078 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-213ENST00000433709 IGBP1P78318 339 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 SULT6B1Q6IMI4 303 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 ZNF585AQ6P3V2 769 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 FAM111BQ6SJ93 734 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 BTNL9Q6UXG8 535 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 FATE1Q969F0 183 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 TCF25Q9BQ70 676 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 DEF6Q9H4E7 631 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 ZNF277Q9NRM2 450 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-213ENST00000433709 MKS1Q9NXB0 559 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 TNKSO95271 1327 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 KDRP35968 1356 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 LY75O60449 1722 aa7.18□□□□□ -1.26
HDAC9-213ENST00000433709 FZD9O00144 591 aa7.17□□□□□ -1.26
HDAC9-213ENST00000433709 PCDHGA12O60330 932 aa7.17□□□□□ -1.26
HDAC9-213ENST00000433709 CFBP00751 764 aa7.17□□□□□ -1.26
HDAC9-213ENST00000433709 COMTP21964 271 aa7.17□□□□□ -1.26
HDAC9-213ENST00000433709 MEF2AQ02078 507 aaPredicted RBP7.17□□□□□ -1.26
HDAC9-213ENST00000433709 PCBP2Q15366 365 aaKnown RBP eCLIP7.17□□□□□ -1.26
HDAC9-213ENST00000433709 Q6ZSN1 163 aa7.17□□□□□ -1.26
HDAC9-213ENST00000433709 PRRT2Q7Z6L0 340 aaPredicted RBP7.17□□□□□ -1.26
HDAC9-213ENST00000433709 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms