RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TSPAN18Q96SJ8 248 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 KCTD10Q9H3F6 313 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 CLSTN2Q9H4D0 955 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 TLE6Q9H808 572 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 PDE11AQ9HCR9 933 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 NGRNQ9NPE2 291 aaKnown RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 MRPL17Q9NRX2 175 aaKnown RBP16.82■□□□□ 0.28
TREX1-201ENST00000433541 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 DERAQ9Y315 318 aa16.82■□□□□ 0.28
TREX1-201ENST00000433541 MBD3O95983 291 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 SOD2P04179 222 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 TNNI1P19237 187 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 NR2F2P24468 414 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 RPL13P26373 211 aaKnown RBP16.81■□□□□ 0.28
TREX1-201ENST00000433541 RPL9P32969 192 aaKnown RBP16.81■□□□□ 0.28
TREX1-201ENST00000433541 NRIP1P48552 1158 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 POU5F1Q01860 360 aaKnown RBP16.81■□□□□ 0.28
TREX1-201ENST00000433541 ELAVL2Q12926 359 aaKnown RBP16.81■□□□□ 0.28
TREX1-201ENST00000433541 SURF1Q15526 300 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 UPP1Q16831 310 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 USP41Q3LFD5 358 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 FAM171A1Q5VUB5 890 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 SPATA20Q8TB22 786 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 CCDC127Q96BQ5 260 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 ANKRD36BP1Q96IX9 119 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 KIAA1468Q9P260 1216 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
TREX1-201ENST00000433541 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 PER2O15055 1255 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 TNNC2P02585 160 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 KRT19P08727 400 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 CTSAP10619 480 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 PPP1R2P41236 205 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 CAMK1Q14012 370 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
TREX1-201ENST00000433541 ADGRD2Q7Z7M1 963 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 NT5DC4Q86YG4 428 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 GPR62Q9BZJ7 368 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 SSX2IPQ9Y2D8 614 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 VWA8A3KMH1 1905 aa16.8■□□□□ 0.28
TREX1-201ENST00000433541 SCN1AP35498 2009 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 I3L4J1 428 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 CYP3A5P20815 502 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 BRCC3P46736 316 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 SPATA1Q5VX52 437 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 DSTYKQ6XUX3 929 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 EFCAB13Q8IY85 973 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 TMEM130Q8N3G9 435 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
TREX1-201ENST00000433541 VN1R3Q9BXE9 311 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 EMILIN2Q9BXX0 1053 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 CTNND2Q9UQB3 1225 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 TRAF3IP3Q9Y228 551 aa16.79■□□□□ 0.28
TREX1-201ENST00000433541 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 TMEM189-UBE2V1I3L0A0 370 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 FSCN2O14926 492 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 ADRB2P07550 413 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 KRT13P13646 458 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 ADAM9Q13443 819 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 MORC3Q14149 939 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 USP37Q86T82 979 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 ADSSL1Q8N142 457 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
TREX1-201ENST00000433541 TRIML1Q8N9V2 468 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 GPT2Q8TD30 523 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 TTPALQ9BTX7 342 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 MTMR12Q9C0I1 747 aa16.78■□□□□ 0.28
TREX1-201ENST00000433541 REV3LO60673 3130 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 BICDL2A1A5D9 508 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 CETN3O15182 167 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 PHACTR2O75167 634 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 ITGB3P05106 788 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 KLRC2P26717 231 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 LRPAP1P30533 357 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.28
TREX1-201ENST00000433541 NDUFV1P49821 464 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 WNT7BP56706 349 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 CREMQ03060 361 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 HYAL1Q12794 435 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 PSMD6Q15008 389 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 PTPN14Q15678 1187 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 ZBTB6Q15916 424 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 DUOXA2Q1HG44 320 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 C9orf57Q5W0N0 161 aa16.77■□□□□ 0.28
TREX1-201ENST00000433541 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms