RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 KIF4AO95239 1232 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 RPL9P32969 192 aaKnown RBP15.59■□□□□ 0.09
CSTF3-202ENST00000431742 CLCNKBP51801 687 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 GUCY2FP51841 1108 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 CLDN10P78369 228 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 FKBP3Q00688 224 aaKnown RBP15.59■□□□□ 0.09
CSTF3-202ENST00000431742 UBE3AQ05086 875 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 ENPEPQ07075 957 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 SKOR2Q2VWA4 1001 aaPredicted RBP15.59■□□□□ 0.09
CSTF3-202ENST00000431742 CEP135Q66GS9 1140 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 CD300LGQ6UXG3 332 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 RNF168Q8IYW5 571 aaPredicted RBP15.59■□□□□ 0.09
CSTF3-202ENST00000431742 TMEM130Q8N3G9 435 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 SPPL3Q8TCT6 385 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 BORCS6Q96GS4 357 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 VN1R3Q9BXE9 311 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 PRDM12Q9H4Q4 367 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 LZTS1Q9Y250 596 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 FRMD4BQ9Y2L6 1034 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
CSTF3-202ENST00000431742 PRG3Q9Y2Y8 225 aaPredicted RBP15.59■□□□□ 0.09
CSTF3-202ENST00000431742 RFXAPO00287 272 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CETN3O15182 167 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 GRM6O15303 877 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 SLC16A3O15427 465 aaKnown RBP15.58■□□□□ 0.08
CSTF3-202ENST00000431742 DNAJB1P25685 340 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 PSMC2P35998 433 aaKnown RBP15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CAMK1Q14012 370 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CT47A1Q5JQC4 288 aaPredicted RBP15.58■□□□□ 0.08
CSTF3-202ENST00000431742 WDR49Q8IV35 697 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 FAM186BQ8IYM0 893 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 DEFB123Q8N688 67 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 C3orf58Q8NDZ4 430 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 BEST2Q8NFU1 509 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CXorf38Q8TB03 319 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 PARD3BQ8TEW8 1205 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 RABGGTAQ92696 567 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 DDX27Q96GQ7 796 aaKnown RBP15.58■□□□□ 0.08
CSTF3-202ENST00000431742 TMEM169Q96HH4 297 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 FAM84AQ96KN4 292 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CEP63Q96MT8 703 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 FAM161BQ96MY7 647 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 GUCD1Q96NT3 240 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 CGRRF1Q99675 332 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 LMAN2LQ9H0V9 348 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 ALG13Q9NP73 1137 aaKnown RBP15.58■□□□□ 0.08
CSTF3-202ENST00000431742 INTS13Q9NVM9 706 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 MTMR10Q9NXD2 777 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 DACH1Q9UI36 760 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 ADAM28Q9UKQ2 775 aa15.58■□□□□ 0.08
CSTF3-202ENST00000431742 ANO9A1A5B4 782 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 PODXLO00592 558 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 POU3F3P20264 500 aaPredicted RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 IGFBP6P24592 240 aaPredicted RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 ERCC5P28715 1186 aaPredicted RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 STX17P56962 302 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 TFAMQ00059 246 aaKnown RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 ADGRE1Q14246 886 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 STX1AQ16623 288 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 C1orf220Q5T0J3 134 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 C9orf57Q5W0N0 161 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 DCLRE1AQ6PJP8 1040 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 INTS8Q75QN2 995 aaKnown RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 DDX53Q86TM3 631 aaKnown RBP15.57■□□□□ 0.08
CSTF3-202ENST00000431742 OR5B17Q8NGF7 314 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 TMC2Q8TDI7 906 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 CCDC127Q96BQ5 260 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 EEF2KMTQ96G04 330 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 MTMR12Q9C0I1 747 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 DPP3Q9NY33 737 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 REV3LO60673 3130 aa15.57■□□□□ 0.08
CSTF3-202ENST00000431742 LRRIQ3A6PVS8 624 aaPredicted RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 PIRO00625 290 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 PPEF2O14830 753 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 DLATP10515 647 aaKnown RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 EPB41P11171 864 aaKnown RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 BFSP1Q12934 665 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 CSGALNACT2Q8N6G5 542 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 C1orf127Q8N9H9 656 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 CACTINQ8WUQ7 758 aaKnown RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 POF1BQ8WVV4 589 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 ZNF516Q92618 1163 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 FNBP1Q96RU3 617 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 POP1Q99575 1024 aaKnown RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 CDX2Q99626 313 aaPredicted RBP15.56■□□□□ 0.08
CSTF3-202ENST00000431742 FUCA2Q9BTY2 467 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 ANO10Q9NW15 660 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 STK39Q9UEW8 545 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 ITGA11Q9UKX5 1188 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 PLXNA3P51805 1871 aa15.56■□□□□ 0.08
CSTF3-202ENST00000431742 SF3B1O75533 1304 aaKnown RBP eCLIP15.55■□□□□ 0.087e-8■■■■■ 37.5
CSTF3-202ENST00000431742 FSCN2O14926 492 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 B3GAT3O94766 335 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 TMEM191BP0C7N4 346 aa15.55■□□□□ 0.08
CSTF3-202ENST00000431742 AARSP49588 968 aaKnown RBP eCLIP15.55■□□□□ 0.08
CSTF3-202ENST00000431742 DLG4P78352 724 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms