RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 ROR1Q01973 937 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 SPEM2Q0P670 501 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 BSNDQ8WZ55 320 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 ASB16Q96NS5 453 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 NACC1Q96RE7 527 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 LMAN1LQ9HAT1 526 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 BRMS1Q9HCU9 246 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 ZNF334Q9HCZ1 680 aaPredicted RBP24.32■■□□□ 1.48
PTPRA-207ENST00000431048 CHD8Q9HCK8 2581 aa24.32■■□□□ 1.48
PTPRA-207ENST00000431048 NEMFO60524 1076 aa24.31■■□□□ 1.48
PTPRA-207ENST00000431048 EDN1P05305 212 aa24.31■■□□□ 1.48
PTPRA-207ENST00000431048 CATSPER3Q86XQ3 398 aa24.31■■□□□ 1.48
PTPRA-207ENST00000431048 FAM3CQ92520 227 aa24.31■■□□□ 1.48
PTPRA-207ENST00000431048 CORO1BQ9BR76 489 aa24.31■■□□□ 1.48
PTPRA-207ENST00000431048 ORC3Q9UBD5 711 aaPredicted RBP24.31■■□□□ 1.48
PTPRA-207ENST00000431048 WDR27A2RRH5 827 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 PRRG1O14668 218 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 CTDNEP1O95476 244 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 PSMC3P17980 439 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 CYP11B2P19099 503 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 BRCC3P46736 316 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 GRM2Q14416 872 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 PPP2R5AQ15172 486 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 ST3GAL2Q16842 350 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 XKR4Q5GH76 650 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 C3orf58Q8NDZ4 430 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 DEPTORQ8TB45 409 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 DEPDC1BQ8WUY9 529 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 TCEAL4Q96EI5 215 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 POLR3CQ9BUI4 534 aaPredicted RBP24.3■■□□□ 1.48
PTPRA-207ENST00000431048 TRPV4Q9HBA0 871 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 USP20Q9Y2K6 914 aa24.3■■□□□ 1.48
PTPRA-207ENST00000431048 MAP1BP46821 2468 aaKnown RBP24.29■■□□□ 1.48
PTPRA-207ENST00000431048 SMIM28A0A1B0GU29 152 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 CXCL12P48061 93 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 EFNA5P52803 228 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 MRPL58Q14197 206 aaKnown RBP24.29■■□□□ 1.48
PTPRA-207ENST00000431048 GLRA4Q5JXX5 417 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 TPGS2Q68CL5 300 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 ALKAL1Q6UXT8 129 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 APBB1IPQ7Z5R6 666 aaPredicted RBP24.29■■□□□ 1.48
PTPRA-207ENST00000431048 SMARCD2Q92925 531 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 MAFFQ9ULX9 164 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.29■■□□□ 1.48
PTPRA-207ENST00000431048 ZFHX4Q86UP3 3567 aa24.29■■□□□ 1.48
PTPRA-207ENST00000431048 H7C4K7 107 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 I3L4J1 428 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 SYN3O14994 580 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 FOXD2O60548 495 aaPredicted RBP24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CHRNB1P11230 501 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 GDI1P31150 447 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CNR2P34972 360 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CCR2P41597 374 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CSRP2Q16527 193 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 PPM1JQ5JR12 505 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CYP4A22Q5TCH4 519 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 NT5DC1Q5TFE4 455 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 PADI6Q6TGC4 694 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 VITQ6UXI7 678 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 PDZD4Q76G19 769 aaPredicted RBP24.28■■□□□ 1.48
PTPRA-207ENST00000431048 CYP4F11Q9HBI6 524 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 SEMA4GQ9NTN9 838 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 INSL5Q9Y5Q6 135 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 PIAS3Q9Y6X2 628 aa24.28■■□□□ 1.48
PTPRA-207ENST00000431048 NRG2O14511 850 aaPredicted RBP24.27■■□□□ 1.48
PTPRA-207ENST00000431048 MED24O75448 989 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 PAPSS2O95340 614 aaPredicted RBP24.27■■□□□ 1.48
PTPRA-207ENST00000431048 SEC24AO95486 1093 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 FDPSP14324 419 aaKnown RBP24.27■■□□□ 1.48
PTPRA-207ENST00000431048 LPAL2Q16609 132 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 ATF7IP2Q5U623 682 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 MFSD6LQ8IWD5 586 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 SPEM1Q8N4L4 309 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 LEMD2Q8NC56 503 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 MSANTD3Q96H12 275 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 GOLGA2P5Q9HBQ8 144 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 SLC38A7Q9NVC3 462 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 TPCN1Q9ULQ1 816 aa24.27■■□□□ 1.48
PTPRA-207ENST00000431048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.26■■□□□ 1.47
PTPRA-207ENST00000431048 WNT7AO00755 349 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 MOSPD3O75425 235 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 LIG1P18858 919 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 EPHA5P54756 1037 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 SOX4Q06945 474 aaPredicted RBP24.26■■□□□ 1.47
PTPRA-207ENST00000431048 SIM2Q14190 667 aaPredicted RBP24.26■■□□□ 1.47
PTPRA-207ENST00000431048 C1orf228Q6PIY5 440 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 PRR23BQ6ZRT6 265 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 E2F7Q96AV8 911 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 ZSWIM3Q96MP5 696 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 TNFSF13BQ9Y275 285 aa24.26■■□□□ 1.47
PTPRA-207ENST00000431048 COL4A2P08572 1712 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 ARHGEF35A5YM69 484 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 BTBD18B2RXH4 712 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 ARNTLO00327 626 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 ZNF263O14978 683 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 HRO43593 1189 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 RPA1P27694 616 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 GRM5P41594 1212 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 SATB1Q01826 763 aa24.25■■□□□ 1.47
PTPRA-207ENST00000431048 GAS6Q14393 721 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms