RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 DNMT3BQ9UBC3 853 aaKnown RBP17.8■□□□□ 0.44
PTPRA-206ENST00000430705 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 NRG2O14511 850 aaPredicted RBP17.79■□□□□ 0.44
PTPRA-206ENST00000430705 CXCL8P10145 99 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 SRFP11831 508 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 PLCG1P19174 1290 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 TNFSF9P41273 254 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 ZNF131P52739 623 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 CUL4AQ13619 759 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 ZBTB41Q5SVQ8 909 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 LARP1BQ659C4 914 aaKnown RBP17.79■□□□□ 0.44
PTPRA-206ENST00000430705 SLC8B1Q6J4K2 584 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 PARM1Q6UWI2 310 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 ZPBP2Q6X784 338 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 GPR152Q8TDT2 470 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 AK8Q96MA6 479 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 TCHPQ9BT92 498 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
PTPRA-206ENST00000430705 SPAG1Q07617 926 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 STRN3Q13033 797 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 MRPL58Q14197 206 aaKnown RBP17.78■□□□□ 0.44
PTPRA-206ENST00000430705 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
PTPRA-206ENST00000430705 SLC5A9Q2M3M2 681 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 SLC39A4Q6P5W5 647 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 ANKS3Q6ZW76 656 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 ATOH1Q92858 354 aaPredicted RBP17.78■□□□□ 0.44
PTPRA-206ENST00000430705 FGF13Q92913 245 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 CDK5RAP3Q96JB5 506 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 WNT16Q9UBV4 365 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 FBXL21Q9UKT6 434 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 CDH7Q9ULB5 785 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 CA14Q9ULX7 337 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 ANK1P16157 1881 aa17.78■□□□□ 0.44
PTPRA-206ENST00000430705 FRYLO94915 3013 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 TTC26A0AVF1 554 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 SLC26A4O43511 780 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 TRAPPC3O43617 180 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 ABLIM3O94929 683 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 MCM6Q14566 821 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
PTPRA-206ENST00000430705 USP49Q70CQ1 688 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 NPAS3Q8IXF0 933 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 CCDC105Q8IYK2 499 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 RAD54LQ92698 747 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 NXPE3Q969Y0 559 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 SUSD3Q96L08 255 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 UPF2Q9HAU5 1272 aaKnown RBP17.77■□□□□ 0.44
PTPRA-206ENST00000430705 SLC2A4RGQ9NR83 387 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.77■□□□□ 0.44
PTPRA-206ENST00000430705 COL4A2P08572 1712 aa17.77■□□□□ 0.44
PTPRA-206ENST00000430705 ARHGEF37A1IGU5 675 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 PROB1E7EW31 1015 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 SYN3O14994 580 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 XYLBO75191 536 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 SEC24AO95486 1093 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 PIGRP01833 764 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 RPL9P32969 192 aaKnown RBP17.76■□□□□ 0.43
PTPRA-206ENST00000430705 GUCY2FP51841 1108 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 SMTNP53814 917 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 DHX8Q14562 1220 aaKnown RBP17.76■□□□□ 0.43
PTPRA-206ENST00000430705 PTPAQ15257 358 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 UVSSAQ2YD98 709 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 ING5Q8WYH8 240 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 TBC1D17Q9HA65 648 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 FBXL5Q9UKA1 691 aa17.76■□□□□ 0.43
PTPRA-206ENST00000430705 ZFP37Q9Y6Q3 630 aaPredicted RBP17.76■□□□□ 0.43
PTPRA-206ENST00000430705 PPEF2O14830 753 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 CLDN3O15551 220 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 VNN2O95498 520 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 LONP1P36776 959 aaKnown RBP17.75■□□□□ 0.43
PTPRA-206ENST00000430705 NBL1P41271 181 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 ENOX2Q16206 610 aaKnown RBP17.75■□□□□ 0.43
PTPRA-206ENST00000430705 PABPC1LQ4VXU2 614 aaKnown RBP17.75■□□□□ 0.43
PTPRA-206ENST00000430705 ZNF461Q8TAF7 563 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 ARHGEF3Q9NR81 526 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 LARSQ9P2J5 1176 aaKnown RBP17.75■□□□□ 0.43
PTPRA-206ENST00000430705 TBX20Q9UMR3 447 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 CLIC4Q9Y696 253 aa17.75■□□□□ 0.43
PTPRA-206ENST00000430705 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
PTPRA-206ENST00000430705 TISP43B9A030 160 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 K7ENM7 598 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 GFRA3O60609 400 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 ADRB2P07550 413 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 CLTAP09496 248 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 CEBPBP17676 345 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 LRPAP1P30533 357 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 MCM4P33991 863 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 UBA7P41226 1012 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 AARSP49588 968 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTPRA-206ENST00000430705 RESTQ13127 1097 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 PRSS36Q5K4E3 855 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 SPECC1Q5M775 1068 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
PTPRA-206ENST00000430705 RTL10Q7L3V2 364 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms