RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 BICD1Q96G01 975 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 UROC1Q96N76 676 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 MYADMQ96S97 322 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 TBC1D7Q9P0N9 293 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 STK17AQ9UEE5 414 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 KCNG1Q9UIX4 513 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 NR2E1Q9Y466 385 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 CACNA1HO95180 2353 aa13.66□□□□□ -0.22
SMPD4-204ENST00000430682 USP34Q70CQ2 3546 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 TBC1D4O60343 1298 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 TBCAO75347 108 aaKnown RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ZMYND10O75800 440 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ADRB2P07550 413 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CLTAP09496 248 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 LIG4P49917 911 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CASP5P51878 434 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ELAVL2Q12926 359 aaKnown RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 RAB33AQ14088 237 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 E2F4Q16254 413 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ZNF720Q7Z2F6 126 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 TDRD5Q8NAT2 981 aaKnown RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ST13P5Q8NFI4 369 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CHAMP1Q96JM3 812 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 WDR6Q9NNW5 1121 aaKnown RBP13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CCDC39Q9UFE4 941 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 USTQ9Y2C2 406 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 MYO15AQ9UKN7 3530 aa13.65□□□□□ -0.22
SMPD4-204ENST00000430682 SPTLC2O15270 562 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 OGTO15294 1046 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 C1RP00736 705 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 ADSSP30520 456 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 ACOT2P49753 483 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 WNT7BP56706 349 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 STK38Q15208 465 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 AXDND1Q5T1B0 1012 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 SCARA3Q6AZY7 606 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 POTEHQ6S545 545 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 CRELD2Q6UXH1 353 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 BMP8AQ7Z5Y6 402 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 RHOBTB2Q9BYZ6 727 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 CPSF3Q9UKF6 684 aaKnown RBP13.64□□□□□ -0.23
SMPD4-204ENST00000430682 CLUHO75153 1309 aa13.64□□□□□ -0.23
SMPD4-204ENST00000430682 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 H0YCG3 227 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 CCL16O15467 120 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 F13A1P00488 732 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
SMPD4-204ENST00000430682 STAT6P42226 847 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 ROR1Q01973 937 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 CREMQ03060 361 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 IER5LQ5T953 404 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 HPS3Q969F9 1004 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 PBXIP1Q96AQ6 731 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 SUSD3Q96L08 255 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 SORCS3Q9UPU3 1222 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-204ENST00000430682 BACE2Q9Y5Z0 518 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
SMPD4-204ENST00000430682 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-204ENST00000430682 SPTLC1O15269 473 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
SMPD4-204ENST00000430682 PPP6R2O75170 966 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 SEC24AO95486 1093 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 C8AP07357 584 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 NFICP08651 508 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 LRPAP1P30533 357 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 VCPP55072 806 aaKnown RBP13.62□□□□□ -0.23
SMPD4-204ENST00000430682 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
SMPD4-204ENST00000430682 OTOP3Q7RTS5 596 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms