RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 SLC39A4Q6P5W5 647 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 ELMSAN1Q6PJG2 1045 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 HAUS6Q7Z4H7 955 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 GPR152Q8TDT2 470 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 IKZF4Q9H2S9 585 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 MFSD1Q9H3U5 465 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 TOPORSQ9NS56 1045 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-203ENST00000430038 CA14Q9ULX7 337 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 CLIC4Q9Y696 253 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 CACNA1IQ9P0X4 2223 aa18.69■□□□□ 0.58
CPSF4-203ENST00000430038 SCN1AP35498 2009 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 ABLIM3O94929 683 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 CXCL8P10145 99 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 PLCG1P19174 1290 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 AOC1P19801 751 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 MCM2P49736 904 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 GUCY2FP51841 1108 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 ROR1Q01973 937 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.58
CPSF4-203ENST00000430038 PTPAQ15257 358 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 ZBTB6Q15916 424 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 SLC5A9Q2M3M2 681 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 SLC8B1Q6J4K2 584 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 ZPBP2Q6X784 338 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 GPBP1Q86WP2 473 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 KCTD17Q8N5Z5 321 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 ATOH1Q92858 354 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-203ENST00000430038 FGF13Q92913 245 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 WNT16Q9UBV4 365 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 FBXL21Q9UKT6 434 aa18.68■□□□□ 0.58
CPSF4-203ENST00000430038 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
CPSF4-203ENST00000430038 TTC26A0AVF1 554 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 HOXA9P31269 272 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 ZNF131P52739 623 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 SMTNP53814 917 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 STRN3Q13033 797 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 LIN9Q5TKA1 542 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 PDXDC1Q6P996 788 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 ANKS3Q6ZW76 656 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 APBB1IPQ7Z5R6 666 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-203ENST00000430038 KCNN1Q92952 543 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 EPSTI1Q96J88 318 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 AK8Q96MA6 479 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 KCND2Q9NZV8 630 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 FBXL5Q9UKA1 691 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 CDH7Q9ULB5 785 aa18.67■□□□□ 0.58
CPSF4-203ENST00000430038 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-203ENST00000430038 PTPRZ1P23471 2315 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-203ENST00000430038 LACTBL1A8MY62 500 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 TISP43B9A030 160 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 PPEF2O14830 753 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 CLDN3O15551 220 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 VNN2O95498 520 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 SRFP11831 508 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 NMT1P30419 496 aaKnown RBP18.66■□□□□ 0.58
CPSF4-203ENST00000430038 NUBP1P53384 320 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 ARPP19P56211 112 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 GPC5P78333 572 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 ING5Q8WYH8 240 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 RAD54LQ92698 747 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 SUSD3Q96L08 255 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 SLC38A7Q9NVC3 462 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 TBX20Q9UMR3 447 aa18.66■□□□□ 0.58
CPSF4-203ENST00000430038 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 ANKRD63C9JTQ0 380 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 TRAPPC3O43617 180 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 RPL9P32969 192 aaKnown RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 UBA7P41226 1012 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 ENOX2Q16206 610 aaKnown RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 ZC2HC1CQ53FD0 456 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 BRAPQ7Z569 592 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 NPAS3Q8IXF0 933 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 MYCT1Q8N699 235 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 NXPE3Q969Y0 559 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 CLIC6Q96NY7 704 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 PLA2G2FQ9BZM2 168 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 LARSQ9P2J5 1176 aaKnown RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 DAXXQ9UER7 740 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 ODF2LQ9ULJ1 636 aa18.65■□□□□ 0.58
CPSF4-203ENST00000430038 TIMM13Q9Y5L4 95 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-203ENST00000430038 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-203ENST00000430038 SYN3O14994 580 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 LRRN2O75325 713 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 PIGRP01833 764 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 ADRB2P07550 413 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 POU2F2P09086 479 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 CLTAP09496 248 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 GLULP15104 373 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 MARCKSP29966 332 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-203ENST00000430038 LONP1P36776 959 aaKnown RBP18.64■□□□□ 0.57
CPSF4-203ENST00000430038 CCR2P41597 374 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 RESTQ13127 1097 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 ASCL5Q7RTU5 278 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms