RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SPTLC3Q9NUV7 552 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
PTCH1-207ENST00000429896 A0A1W2PQC6 194 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 RYBPQ8N488 228 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 ZNF784Q8NCA9 323 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CARD6Q9BX69 1037 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 NT5C1AQ9BXI3 368 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 ASNSD1Q9NWL6 643 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 LCP1P13796 627 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 GUCY2FP51841 1108 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 PSMC1P62191 440 aaKnown RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 SH2D4BQ5SQS7 431 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 TTC30BQ8N4P2 665 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 C11orf70Q9BRQ4 267 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 GRB14Q14449 540 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 RHOT2Q8IXI1 618 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 RILPQ96NA2 401 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 ADAM2Q99965 735 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CNOT8Q9UFF9 292 aaKnown RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 STK38LQ9Y2H1 464 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 H7C0C1 242 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 ATP5OP48047 213 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CC2D1AQ6P1N0 951 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 HDXQ7Z353 690 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 NID2Q14112 1375 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CBWD1Q9BRT8 395 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 TRPC7Q9HCX4 862 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
PTCH1-207ENST00000429896 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 SAR1BQ9Y6B6 198 aa13.73□□□□□ -0.21
PTCH1-207ENST00000429896 CYP26A1O43174 497 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 MYBL1P10243 752 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 DSEQ9UL01 958 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 SOWAHDA6NJG2 315 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 LRG1P02750 347 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ELAVL2Q12926 359 aaKnown RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 PRPSAP1Q14558 356 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 TUBBP07437 444 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 KRT15P19012 456 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 SDC4P31431 198 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ATP11AP98196 1134 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 MAPRE1Q15691 268 aaKnown RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ZPBP2Q6X784 338 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 WDR49Q8IV35 697 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 ZNF296Q8WUU4 475 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 POMCP01189 267 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 SEZ6LQ9BYH1 1024 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 HIPK3Q9H422 1215 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 GTF2H1P32780 548 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 CRYBB1P53674 252 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 EHHADHQ08426 723 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 LRRC31Q6UY01 552 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 LENG1Q96BZ8 264 aaPredicted RBP13.72□□□□□ -0.21
PTCH1-207ENST00000429896 MTMR12Q9C0I1 747 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
PTCH1-207ENST00000429896 KCNA2P16389 499 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 CTAGE3PQ8IX95 158 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 EIF3CLB5ME19 914 aaKnown RBP13.71□□□□□ -0.21
PTCH1-207ENST00000429896 KRIT1O00522 736 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 BUB1BO60566 1050 aaPredicted RBP13.71□□□□□ -0.21
PTCH1-207ENST00000429896 IFNB1P01574 187 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 AKAP5P24588 427 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 PCK1P35558 622 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 EIF3CQ99613 913 aaKnown RBP13.71□□□□□ -0.21
PTCH1-207ENST00000429896 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 IRS2Q9Y4H2 1338 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 NDUFA10O95299 355 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 APOEP02649 317 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 CXCL8P10145 99 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 GPC5P78333 572 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
PTCH1-207ENST00000429896 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms