RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 C5orf60A6NFR6 353 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 RASA4BC9J798 803 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 RASA4O43374 803 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 PCCAP05165 728 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 GARSP41250 739 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 NT5DC1Q5TFE4 455 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 FAXDC2Q96IV6 333 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 RAB26Q9ULW5 256 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 NFE2L1Q14494 772 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 AOC3Q16853 763 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 CCDC137Q6PK04 289 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 NCCRP1Q6ZVX7 275 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 GSPT2Q8IYD1 628 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 ZNF420Q8TAQ5 688 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 PNKPQ96T60 521 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 PUS3Q9BZE2 481 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 PNPLA3Q9NST1 481 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 GCNT4Q9P109 453 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 COL4A3BPQ9Y5P4 624 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 SCN11AQ9UI33 1791 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 ARHGEF35A5YM69 484 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 M0R3G1 203 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 DDB1Q16531 1140 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 MAEAQ7L5Y9 396 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 TMPRSS6Q8IU80 811 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 STAG2Q8N3U4 1231 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 SDR16C5Q8N3Y7 309 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 PRPF18Q99633 342 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 STARD13Q9Y3M8 1113 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 SLIT1O75093 1534 aa7.92□□□□□ -1.14
SYNPO2-202ENST00000429713 RBM47A0AV96 593 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MCL1Q07820 350 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ASAP3Q8TDY4 903 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 GPN3Q9UHW5 284 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 BAG5Q9UL15 447 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MROH1Q8NDA8 1641 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 INHBAP08476 426 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 EIF4A3P38919 411 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ADCY8P40145 1251 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SIX6OS1Q8N1H7 587 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TMEM109Q9BVC6 243 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 RRN3Q9NYV6 651 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TFCP2L1Q9NZI6 479 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 KIF13BQ9NQT8 1826 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TCP11X1B4DZS4 312 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 EXOC3O60645 756 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PSMC3P17980 439 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 IL10P22301 178 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SLC1A4P43007 532 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PTDSS1P48651 473 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PEX5P50542 639 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ARFIP2P53365 341 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ITGB3BPQ13352 177 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PCDHGA4Q9Y5G9 962 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 UBR1Q8IWV7 1749 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 INPP1P49441 399 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TTC13Q8NBP0 860 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 KIFC2Q96AC6 838 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 LRRC39Q96DD0 335 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ADD3Q9UEY8 706 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 RTCBQ9Y3I0 505 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SNX2O60749 519 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PRCPP42785 496 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 IFNAR2P48551 515 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TIMM50Q3ZCQ8 353 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ZC2HC1CQ53FD0 456 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SHC4Q6S5L8 630 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 UNC45BQ8IWX7 931 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM133AQ8N9E0 248 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ERP27Q96DN0 273 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 BIRC8Q96P09 236 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 RTFDC1Q9BY42 306 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 WNT8AQ9H1J5 351 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 LIN52Q52LA3 116 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 BNIPLQ7Z465 357 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TTC30AQ86WT1 665 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SPATA31D1Q6ZQQ2 1576 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 NR2F2P24468 414 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MCAMP43121 646 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 SHCBP1Q8NEM2 672 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PLEKHO2Q8TD55 490 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ERGIC2Q96RQ1 377 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 DDX28Q9NUL7 540 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM186AA6NE01 2351 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM170AA1A519 330 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 ITIH2P19823 946 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 PTPREP23469 700 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 CCNE1P24864 410 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MTF1Q14872 753 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MTFR1Q15390 333 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 THEMIS2Q5TEJ8 643 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 TC2NQ8N9U0 490 aa7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 MLPHQ9BV36 600 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-202ENST00000429713 DNAAF2Q9NVR5 837 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms