RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 ASTLQ6HA08 431 aaPredicted RBP29.73■■■□□ 2.35
LMO1-202ENST00000428101 MYCT1Q8N699 235 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 NXPE3Q969Y0 559 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 PARVGQ9HBI0 331 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 TBX20Q9UMR3 447 aa29.73■■■□□ 2.35
LMO1-202ENST00000428101 TBC1D4O60343 1298 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 FAM13AO94988 1023 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 NPR3P17342 541 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 MATR3P43243 847 aaKnown RBP eCLIP29.72■■■□□ 2.35
LMO1-202ENST00000428101 NUBP1P53384 320 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 RESTQ13127 1097 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 SLC8B1Q6J4K2 584 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 USP49Q70CQ1 688 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 TMEM130Q8N3G9 435 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 RASSF8Q8NHQ8 419 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 BICD1Q96G01 975 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 EPSTI1Q96J88 318 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 FIZ1Q96SL8 496 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 BACH2Q9BYV9 841 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 MFSD1Q9H3U5 465 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 PLEKHA5Q9HAU0 1116 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 TUBGCP4Q9UGJ1 667 aa29.72■■■□□ 2.35
LMO1-202ENST00000428101 ANHXE9PGG2 379 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 SYN3O14994 580 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 POU2F2P09086 479 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 CLTAP09496 248 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 SYT1P21579 422 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 MRPL58Q14197 206 aaKnown RBP29.71■■■□□ 2.35
LMO1-202ENST00000428101 SPECC1Q5M775 1068 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 CWF19L1Q69YN2 538 aaKnown RBP29.71■■■□□ 2.35
LMO1-202ENST00000428101 LARP4BQ92615 738 aaKnown RBP29.71■■■□□ 2.35
LMO1-202ENST00000428101 NUB1Q9Y5A7 615 aa29.71■■■□□ 2.35
LMO1-202ENST00000428101 TTC26A0AVF1 554 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 K7ENM7 598 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 TRAK2O60296 914 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 FAM189A1O60320 539 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 XYLBO75191 536 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 PIGRP01833 764 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 MARCKSP29966 332 aaPredicted RBP29.7■■■□□ 2.35
LMO1-202ENST00000428101 DDIT3P35638 169 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 TNFSF9P41273 254 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 LIG4P49917 911 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 CLCN5P51795 746 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 ROR1Q01973 937 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 SPAG1Q07617 926 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 HTR4Q13639 388 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 FAM173BQ6P4H8 233 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 RTL10Q7L3V2 364 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 ST13P5Q8NFI4 369 aaPredicted RBP29.7■■■□□ 2.35
LMO1-202ENST00000428101 SUSD3Q96L08 255 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 FBXO2Q9UK22 296 aaPredicted RBP29.7■■■□□ 2.35
LMO1-202ENST00000428101 FBXL21Q9UKT6 434 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 POLIQ9UNA4 740 aa29.7■■■□□ 2.35
LMO1-202ENST00000428101 GALR2O43603 387 aaPredicted RBP29.69■■■□□ 2.34
LMO1-202ENST00000428101 KRT18P05783 430 aaKnown RBP29.69■■■□□ 2.34
LMO1-202ENST00000428101 SCP2P22307 547 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 ZBTB6Q15916 424 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 ZBTB41Q5SVQ8 909 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 SIX5Q8N196 739 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 ZNF461Q8TAF7 563 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 HCFC1R1Q9NWW0 138 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 DNMT3BQ9UBC3 853 aaKnown RBP29.69■■■□□ 2.34
LMO1-202ENST00000428101 CDH7Q9ULB5 785 aa29.69■■■□□ 2.34
LMO1-202ENST00000428101 ZFP37Q9Y6Q3 630 aaPredicted RBP29.69■■■□□ 2.34
LMO1-202ENST00000428101 WDR27A2RRH5 827 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 HNRNPDLO14979 420 aaKnown RBP29.68■■■□□ 2.34
LMO1-202ENST00000428101 ABLIM3O94929 683 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 SLC39A4Q6P5W5 647 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 FLCNQ8NFG4 579 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 ITFG1Q8TB96 612 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 INTS4Q96HW7 963 aaKnown RBP29.68■■■□□ 2.34
LMO1-202ENST00000428101 ZHX3Q9H4I2 956 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 WNT16Q9UBV4 365 aa29.68■■■□□ 2.34
LMO1-202ENST00000428101 SRPRBQ9Y5M8 271 aaKnown RBP29.68■■■□□ 2.34
LMO1-202ENST00000428101 CFHP08603 1231 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 SRFP11831 508 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 NMT1P30419 496 aaKnown RBP29.67■■■□□ 2.34
LMO1-202ENST00000428101 MCM4P33991 863 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 GTF2BQ00403 316 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 FGF13Q92913 245 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 KIF12Q96FN5 646 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 FBXL5Q9UKA1 691 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 NUMBLQ9Y6R0 609 aa29.67■■■□□ 2.34
LMO1-202ENST00000428101 A0A0B4J269 797 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 KRBA1A5PL33 1030 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 LACTBL1A8MY62 500 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 H7C4K7 107 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 OGTO15294 1046 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 PI15O43692 258 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 ADRB2P07550 413 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 LRPAP1P30533 357 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 ENOX2Q16206 610 aaKnown RBP29.66■■■□□ 2.34
LMO1-202ENST00000428101 KYAT1Q16773 422 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 DDX12PQ92771 950 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 CLIC6Q96NY7 704 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 RPP25Q9BUL9 199 aaKnown RBP29.66■■■□□ 2.34
LMO1-202ENST00000428101 USP34Q70CQ2 3546 aa29.66■■■□□ 2.34
LMO1-202ENST00000428101 MYH15Q9Y2K3 1946 aa29.65■■■□□ 2.34
LMO1-202ENST00000428101 ARHGEF37A1IGU5 675 aa29.65■■■□□ 2.34
LMO1-202ENST00000428101 H0Y858 1186 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms