RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TMEM8AQ9HCN3 771 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 NECTIN3Q9NQS3 549 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 TLR9Q9NR96 1032 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 GPRC5DQ9NZD1 345 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 MAGEL2Q9UJ55 1249 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 CTNND2Q9UQB3 1225 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 EIF3FO00303 357 aaPredicted RBP5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 BTN3A1O00481 513 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 TIMM44O43615 452 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 DYRK3O43781 588 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 RNASEH2AO75792 299 aaKnown RBP5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 MYL4P12829 197 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 IL2RBP14784 551 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 DOC2BQ14184 412 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 KCTD2Q14681 263 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 EIF4HQ15056 248 aaKnown RBP5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 ATP2B3Q16720 1220 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 TANGO2Q6ICL3 276 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 RETSATQ6NUM9 610 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 SLC6A17Q9H1V8 727 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 PAK6Q9NQU5 681 aaPredicted RBP5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 MAN2B2Q9Y2E5 1009 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 CRYL1Q9Y2S2 319 aa5.38□□□□□ -1.55
NUDCD1-202ENST00000427660 EYA2O00167 538 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 ARHGAP6O43182 974 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 CYP2C8P10632 490 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 FBLN1P23142 703 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 FOXO4P98177 505 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SLC13A2Q13183 592 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 RAB32Q13637 225 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 MICU3Q86XE3 530 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 DTX1Q86Y01 620 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SLC30A5Q8TAD4 765 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 FAM71BQ8TC56 605 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SNRNP27Q8WVK2 155 aaKnown RBP5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 IPCEF1Q8WWN9 437 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 C18orf8Q96DM3 657 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SEC62Q99442 399 aaKnown RBP5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SORBS1Q9BX66 1292 aaKnown RBP5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 SRRDQ9UH36 339 aa5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 AJAP1Q9UKB5 411 aaPredicted RBP5.37□□□□□ -1.55
NUDCD1-202ENST00000427660 MATN4O95460 622 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ABHD16AO95870 558 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 AHSGP02765 367 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 SP140Q13342 867 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 FBXO47Q5MNV8 452 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 FBXO38Q6PIJ6 1188 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 C1orf122Q6ZSJ8 110 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 RNF44Q7L0R7 432 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 CLEC14AQ86T13 490 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 TRMT2AQ8IZ69 625 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 LILRA3Q8N6C8 439 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 AGBL5Q8NDL9 886 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ZNF384Q8TF68 577 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 TNPO1Q92973 898 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 GJB4Q9NTQ9 266 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 RLIMQ9NVW2 624 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 SLC13A4Q9UKG4 626 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MBD3L4A6NDZ8 208 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MBD3L3A6NE82 208 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 CYP7B1O75881 506 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ALDH1A2O94788 518 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MBD4O95243 580 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MED26O95402 600 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 CD1AP06126 327 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 GYPEP15421 78 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 HDCP19113 662 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 PCSK1P29120 753 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ADCY8P40145 1251 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 KCNJ5P48544 419 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MPP1Q00013 466 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 RASSF7Q02833 373 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 EXOSC9Q06265 439 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ADAM9Q13443 819 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 EFR3AQ14156 821 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 JMJD6Q6NYC1 403 aaPredicted RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MZT2BQ6NZ67 158 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 PLXDC1Q8IUK5 500 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 MBNL3Q9NUK0 354 aaKnown RBP5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 ADAMTS6Q9UKP5 1117 aa5.36□□□□□ -1.55
NUDCD1-202ENST00000427660 EXOC5O00471 708 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 PODXLO00592 558 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 SNX2O60749 519 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 ITGA10O75578 1167 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 ITGA5P08648 1049 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 GNAI3P08754 354 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 KLRC1P26715 233 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 ITGA1P56199 1179 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 GNAI1P63096 354 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 ZNF200P98182 395 aaPredicted RBP5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 G3BP1Q13283 466 aaKnown RBP eCLIP5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 PLCL1Q15111 1095 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 TARBP2Q15633 366 aaKnown RBP5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 RAB30Q15771 203 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 FAAH2Q6GMR7 532 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
NUDCD1-202ENST00000427660 ADGRG2Q8IZP9 1017 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms