RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PDILTQ8N807 584 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 SPRYD3Q8NCJ5 442 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 ZNF707Q96C28 371 aaPredicted RBP20.08■□□□□ 0.81
GPC1-205ENST00000427506 FAM212AQ96EL1 285 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 FIZ1Q96SL8 496 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 PRKD2Q9BZL6 878 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 RPF1Q9H9Y2 349 aaKnown RBP20.08■□□□□ 0.81
GPC1-205ENST00000427506 WDR6Q9NNW5 1121 aaKnown RBP20.08■□□□□ 0.81
GPC1-205ENST00000427506 TUBGCP4Q9UGJ1 667 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 FBXW11Q9UKB1 542 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 CDY1Q9Y6F8 540 aa20.08■□□□□ 0.81
GPC1-205ENST00000427506 CLUHO75153 1309 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 IDEP14735 1019 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 MCM4P33991 863 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 RAB33AQ14088 237 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
GPC1-205ENST00000427506 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
GPC1-205ENST00000427506 RHOBTB2Q9BYZ6 727 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 MRPL44Q9H9J2 332 aaKnown RBP20.07■□□□□ 0.8
GPC1-205ENST00000427506 SEL1LQ9UBV2 794 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 BACE2Q9Y5Z0 518 aa20.07■□□□□ 0.8
GPC1-205ENST00000427506 A0A0B4J269 797 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 TTC26A0AVF1 554 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 LACTBL1A8MY62 500 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 XPOTO43592 962 aaKnown RBP20.06■□□□□ 0.8
GPC1-205ENST00000427506 C8AP07357 584 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 ZSCAN22P10073 491 aaPredicted RBP20.06■□□□□ 0.8
GPC1-205ENST00000427506 GAP43P17677 238 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
GPC1-205ENST00000427506 ZBTB41Q5SVQ8 909 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 ZNF720Q7Z2F6 126 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 UBALD2Q8IYN6 164 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 ST6GALNAC4Q9H4F1 302 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 TBC1D7Q9P0N9 293 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 UBQLN1Q9UMX0 589 aaKnown RBP20.06■□□□□ 0.8
GPC1-205ENST00000427506 POLIQ9UNA4 740 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 TRIP11Q15643 1979 aa20.06■□□□□ 0.8
GPC1-205ENST00000427506 A0A087X0B3 334 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 ANKRD63C9JTQ0 380 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 H7C4K7 107 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 SYN3O14994 580 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 PPP6R2O75170 966 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 HNRNPA1P09651 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
GPC1-205ENST00000427506 ARPP19P56211 112 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 ENOX2Q16206 610 aaKnown RBP20.05■□□□□ 0.8
GPC1-205ENST00000427506 AXDND1Q5T1B0 1012 aaPredicted RBP20.05■□□□□ 0.8
GPC1-205ENST00000427506 ADALQ6DHV7 355 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 SLFN12LQ6IEE8 588 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 SLC39A4Q6P5W5 647 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 RSPO2Q6UXX9 243 aaPredicted RBP20.05■□□□□ 0.8
GPC1-205ENST00000427506 BMP8AQ7Z5Y6 402 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 SUGP1Q8IWZ8 645 aaKnown RBP20.05■□□□□ 0.8
GPC1-205ENST00000427506 SLC7A14Q8TBB6 771 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 HVCN1Q96D96 273 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
GPC1-205ENST00000427506 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.05■□□□□ 0.8
GPC1-205ENST00000427506 CITO14578 2027 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 GCNT3O95395 438 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 YEATS4O95619 227 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 F13A1P00488 732 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 CYP3A5P20815 502 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 GET4Q7L5D6 327 aaPredicted RBP20.04■□□□□ 0.8
GPC1-205ENST00000427506 CD302Q8IX05 232 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 FAM122AQ96E09 287 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 SUSD3Q96L08 255 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 CPSF3Q9UKF6 684 aaKnown RBP20.04■□□□□ 0.8
GPC1-205ENST00000427506 AGO2Q9UKV8 859 aaKnown RBP20.04■□□□□ 0.8
GPC1-205ENST00000427506 EXOC7Q9UPT5 735 aa20.04■□□□□ 0.8
GPC1-205ENST00000427506 ARIH1Q9Y4X5 557 aaPredicted RBP20.04■□□□□ 0.8
GPC1-205ENST00000427506 DENND4AQ7Z401 1863 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 C2orf16Q68DN1 1984 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 TISP43B9A030 160 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 TULP1O00294 542 aaPredicted RBP20.03■□□□□ 0.8
GPC1-205ENST00000427506 CCL16O15467 120 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 FAM189A1O60320 539 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 CUTAO60888 179 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 XYLBO75191 536 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 PAPLNO95428 1278 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 ELF1P32519 619 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 ACOT2P49753 483 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 UVSSAQ2YD98 709 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 GRASPQ7Z6J2 395 aaPredicted RBP20.03■□□□□ 0.8
GPC1-205ENST00000427506 TMEM130Q8N3G9 435 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 APPL2Q8NEU8 664 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 BEST2Q8NFU1 509 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 POMGNT1Q8WZA1 660 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 ASIC4Q96FT7 647 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 ACCSQ96QU6 501 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 TSPAN18Q96SJ8 248 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 LRRC27Q9C0I9 530 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 SMOC2Q9H3U7 446 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 PANK4Q9NVE7 773 aa20.03■□□□□ 0.8
GPC1-205ENST00000427506 VWA8A3KMH1 1905 aa20.02■□□□□ 0.8
GPC1-205ENST00000427506 N4BP1O75113 896 aaKnown RBP20.02■□□□□ 0.8
GPC1-205ENST00000427506 LRPAP1P30533 357 aa20.02■□□□□ 0.8
GPC1-205ENST00000427506 HOXA9P31269 272 aa20.02■□□□□ 0.8
GPC1-205ENST00000427506 GUCY2FP51841 1108 aa20.02■□□□□ 0.8
GPC1-205ENST00000427506 ROR1Q01973 937 aa20.02■□□□□ 0.8
GPC1-205ENST00000427506 POSTNQ15063 836 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms