RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 CEP57Q86XR8 500 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 TMEM130Q8N3G9 435 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 ZSWIM2Q8NEG5 633 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 RIN2Q8WYP3 895 aaPredicted RBP19.59■□□□□ 0.73
HERC3-205ENST00000426683 CASP10Q92851 521 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 CCDC34Q96HJ3 373 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 MSLNLQ96KJ4 702 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 TSPAN18Q96SJ8 248 aa19.59■□□□□ 0.73
HERC3-205ENST00000426683 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.59■□□□□ 0.73
HERC3-205ENST00000426683 GOLGA8IPA6NC78 632 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 GOLGA8JA6NMD2 632 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 XPOTO43592 962 aaKnown RBP19.58■□□□□ 0.72
HERC3-205ENST00000426683 EXTL3O43909 919 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 NFICP08651 508 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 CYP3A5P20815 502 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 KLRC2P26717 231 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 BRCC3P46736 316 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 SNW1Q13573 536 aaKnown RBP19.58■□□□□ 0.72
HERC3-205ENST00000426683 BMT2Q1RMZ1 405 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 PUS10Q3MIT2 529 aaKnown RBP19.58■□□□□ 0.72
HERC3-205ENST00000426683 KANK3Q6NY19 840 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 PPFIBP1Q86W92 1011 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 GPR65Q8IYL9 337 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 KIAA0895Q8NCT3 520 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 ENGASEQ8NFI3 743 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 NOC3LQ8WTT2 800 aaKnown RBP19.58■□□□□ 0.72
HERC3-205ENST00000426683 CCDC47Q96A33 483 aaKnown RBP19.58■□□□□ 0.72
HERC3-205ENST00000426683 TTPALQ9BTX7 342 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 ASB7Q9H672 318 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 RXFP1Q9HBX9 757 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 CD207Q9UJ71 328 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 NUB1Q9Y5A7 615 aa19.58■□□□□ 0.72
HERC3-205ENST00000426683 UNC80Q8N2C7 3258 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 I3L4J1 428 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 TULP1O00294 542 aaPredicted RBP19.57■□□□□ 0.72
HERC3-205ENST00000426683 KIAA0391O15091 583 aaKnown RBP19.57■□□□□ 0.72
HERC3-205ENST00000426683 TEX28O15482 410 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 TGFB1I1O43294 461 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 TRAPPC3O43617 180 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 LRPAP1P30533 357 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 FAM160A1Q05DH4 1040 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 TMEM132DQ14C87 1099 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 ANKRD54Q6NXT1 300 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 PRSS55Q6UWB4 352 aaPredicted RBP19.57■□□□□ 0.72
HERC3-205ENST00000426683 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.57■□□□□ 0.72
HERC3-205ENST00000426683 GPD1LQ8N335 351 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 BEST2Q8NFU1 509 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 SLC22A17Q8WUG5 538 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.57■□□□□ 0.72
HERC3-205ENST00000426683 AGPAT3Q9NRZ7 376 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 DERAQ9Y315 318 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 XIRP2A4UGR9 3374 aa19.57■□□□□ 0.72
HERC3-205ENST00000426683 CITO14578 2027 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 GRXCR2A6NFK2 248 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 IL18RAPO95256 599 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 ADH1AP07327 375 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 IL9P15248 144 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 EPCAMP16422 314 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 FGFR3P22607 806 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 KNOP1Q1ED39 458 aaKnown RBP19.56■□□□□ 0.72
HERC3-205ENST00000426683 SPATA1Q5VX52 437 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 HS2ST1Q7LGA3 356 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 BRSK2Q8IWQ3 736 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 RBAKQ9NYW8 714 aaPredicted RBP19.56■□□□□ 0.72
HERC3-205ENST00000426683 HSPBP1Q9NZL4 362 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 C2CD2Q9Y426 696 aa19.56■□□□□ 0.72
HERC3-205ENST00000426683 TRIP11Q15643 1979 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 CLIC2O15247 247 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 MBTPS2O43462 519 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 GADD45BO75293 160 aaPredicted RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 RHOBTB3O94955 611 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 RPL17P18621 184 aaKnown RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 TKTP29401 623 aaKnown RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 MCM4P33991 863 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 CLCN4P51793 760 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 WNT7BP56706 349 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 SNRPFP62306 86 aaKnown RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 CREMQ03060 361 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 SMAD4Q13485 552 aaKnown RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 GLYCTKQ8IVS8 523 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 LNX1Q8TBB1 728 aaPredicted RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 ADAMTS19Q8TE59 1207 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 PIK3R5Q8WYR1 880 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 COL25A1Q9BXS0 654 aaPredicted RBP19.55■□□□□ 0.72
HERC3-205ENST00000426683 FNIP2Q9P278 1114 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
HERC3-205ENST00000426683 PNOCQ13519 176 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 KCNB1Q14721 858 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 PSMD5Q16401 504 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 PDXDC1Q6P996 788 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 SYCE2Q6PIF2 218 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 EFCAB13Q8IY85 973 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 SMRP1Q8NCR6 262 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 TIGD1Q96MW7 591 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 APOL5Q9BWW9 433 aa19.54■□□□□ 0.72
HERC3-205ENST00000426683 ZNF233A6NK53 670 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 HOXB8P17481 243 aaPredicted RBP19.53■□□□□ 0.72
HERC3-205ENST00000426683 CYP2J2P51589 502 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 PALB2Q86YC2 1186 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms