RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 POTEHQ6S545 545 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 APBB1IPQ7Z5R6 666 aaPredicted RBP16.13■□□□□ 0.17
PDAP1-202ENST00000426447 TCEAL4Q96EI5 215 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 ZNF512Q96ME7 567 aaPredicted RBP16.13■□□□□ 0.17
PDAP1-202ENST00000426447 NACC1Q96RE7 527 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 GOLGA2P5Q9HBQ8 144 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 STK36Q9NRP7 1315 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 ZNF263O14978 683 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 NEMFO60524 1076 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 MICAL2O94851 1124 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ABLIM3O94929 683 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 TDGF1P13385 188 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ATF2P15336 505 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 FCARP24071 287 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 CCNE1P24864 410 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 YARSP54577 528 aaKnown RBP16.12■□□□□ 0.17
PDAP1-202ENST00000426447 PRSS36Q5K4E3 855 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 EEF1DP3Q658K8 133 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 SLC8B1Q6J4K2 584 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ZNF687Q8N1G0 1237 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 SMARCD2Q92925 531 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ASB16Q96NS5 453 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 PPP1R10Q96QC0 940 aaKnown RBP16.12■□□□□ 0.17
PDAP1-202ENST00000426447 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
PDAP1-202ENST00000426447 ARID2Q68CP9 1835 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 WDR27A2RRH5 827 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 H7C4K7 107 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 NAMPTP43490 491 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 SATB1Q01826 763 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 CSRP2Q16527 193 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 PADI6Q6TGC4 694 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 CD300LGQ6UXG3 332 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 VITQ6UXI7 678 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 PRR23CQ6ZRP0 262 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 CATSPER3Q86XQ3 398 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 TCEAL8Q8IYN2 117 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 CSGALNACT1Q8TDX6 532 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 BSNDQ8WZ55 320 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 ZSWIM3Q96MP5 696 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 TUFT1Q9NNX1 390 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 TRPV5Q9NQA5 729 aa16.11■□□□□ 0.17
PDAP1-202ENST00000426447 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
PDAP1-202ENST00000426447 SMIM28A0A1B0GU29 152 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 CHURC1-FNTBB4DL54 471 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 HRO43593 1189 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 SEC24AO95486 1093 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 SPATA31C1P0DKV0 1188 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 MYL4P12829 197 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 CNR2P34972 360 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 VIPR2P41587 438 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 FNTBP49356 437 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 IL31Q6EBC2 164 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 YAF2Q8IY57 180 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 HS6ST3Q8IZP7 471 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 C3orf58Q8NDZ4 430 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
PDAP1-202ENST00000426447 IFT74Q96LB3 600 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
PDAP1-202ENST00000426447 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
PDAP1-202ENST00000426447 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 NUB1Q9Y5A7 615 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 INSL5Q9Y5Q6 135 aa16.1■□□□□ 0.17
PDAP1-202ENST00000426447 NRG2O14511 850 aaPredicted RBP16.09■□□□□ 0.17
PDAP1-202ENST00000426447 GDF9O60383 454 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
PDAP1-202ENST00000426447 EDN1P05305 212 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 CHRNB1P11230 501 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 CYP11B2P19099 503 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 CCR2P41597 374 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 KPNA1P52294 538 aaPredicted RBP16.09■□□□□ 0.17
PDAP1-202ENST00000426447 EFNA5P52803 228 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 OSTNP61366 133 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 LRRC32Q14392 662 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 CTXN3Q4LDR2 81 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 TPGS2Q68CL5 300 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
PDAP1-202ENST00000426447 CEP68Q76N32 757 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 LONP2Q86WA8 852 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 SPEM1Q8N4L4 309 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 ZSCAN18Q8TBC5 510 aaPredicted RBP16.09■□□□□ 0.17
PDAP1-202ENST00000426447 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 ASAH2Q9NR71 780 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 EPG5Q9HCE0 2579 aa16.09■□□□□ 0.17
PDAP1-202ENST00000426447 K7ERI5 159 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 PODXLO00592 558 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 SYN3O14994 580 aa16.08■□□□□ 0.16
PDAP1-202ENST00000426447 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
PDAP1-202ENST00000426447 PFKFB2O60825 505 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms