RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SEPT1Q8WYJ6 367 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 PCDHB2Q9Y5E7 798 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MYPNQ86TC9 1320 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 A0A0B4J269 797 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 H0YCG3 227 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 PHF2O75151 1096 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 ICAM3P32942 547 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 DUPD1Q68J44 220 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 SLC13A5Q86YT5 568 aaPredicted RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 RBBP8NLQ8NC74 664 aaPredicted RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 CD101Q93033 1021 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 HERPUD2Q9BSE4 406 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 WNT8AQ9H1J5 351 aa12.36□□□□□ -0.43
UBR4-207ENST00000425413 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
UBR4-207ENST00000425413 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 B4GALT5O43286 388 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 SHBGP04278 402 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 SEC24CP53992 1094 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
UBR4-207ENST00000425413 FAM160B1Q5W0V3 765 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
UBR4-207ENST00000425413 NOVA2Q9UNW9 492 aaKnown RBP12.35□□□□□ -0.43
UBR4-207ENST00000425413 GRIN2DO15399 1336 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 H0YGN5 161 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 KIAA0391O15091 583 aaKnown RBP12.35□□□□□ -0.43
UBR4-207ENST00000425413 ADCY3O60266 1144 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 UNGP13051 313 aaPredicted RBP12.35□□□□□ -0.43
UBR4-207ENST00000425413 CLCN3P51790 818 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 LAMTOR4Q0VGL1 99 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 ORC1Q13415 861 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 NEDD9Q14511 834 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 PPP1R7Q15435 360 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 ADAM22Q9P0K1 906 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 UVRAGQ9P2Y5 699 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 PPP2R3BQ9Y5P8 575 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 NFS1Q9Y697 457 aa12.35□□□□□ -0.43
UBR4-207ENST00000425413 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 FGFR4P22455 802 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 TMOD1P28289 359 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 PTGIRP43119 386 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 MYL6P60660 151 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 SF3A3Q12874 501 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 23.5
UBR4-207ENST00000425413 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 SLFN12LQ6IEE8 588 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 ACSF2Q96CM8 615 aaPredicted RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 CHST7Q9NS84 486 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 MTUS1Q9ULD2 1270 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 PI4K2BG5E9Z4 385 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.431e-12■■■■□ 25.2
UBR4-207ENST00000425413 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 CLTAP09496 248 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 CYP2C8P10632 490 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 TMBIM4Q9HC24 238 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 PPANQ9NQ55 473 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 RBPJLQ9UBG7 517 aa12.34□□□□□ -0.43
UBR4-207ENST00000425413 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
UBR4-207ENST00000425413 CNTNAP2Q9UHC6 1331 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.43
UBR4-207ENST00000425413 CNMDO75829 334 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 PRKCBP05771 671 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 KRT19P08727 400 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.43
UBR4-207ENST00000425413 CHRNA3P32297 505 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.43
UBR4-207ENST00000425413 KCTD2Q14681 263 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 ATP13A4Q4VNC1 1196 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.43
UBR4-207ENST00000425413 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 ENOSF1Q7L5Y1 443 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 PPP1R13LQ8WUF5 828 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 CGRRF1Q99675 332 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 IMPG2Q9BZV3 1241 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.43
UBR4-207ENST00000425413 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.43
UBR4-207ENST00000425413 ZDHHC18Q9NUE0 388 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms