RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SLC8B1Q6J4K2 584 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ZNF280DQ6N043 979 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TCEAL8Q8IYN2 117 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TNFRSF25Q93038 417 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SLITRK6Q9H5Y7 841 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TMEM134Q9H6X4 195 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KMT5AQ9NQR1 393 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 HEBP1Q9NRV9 189 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SMG5Q9UPR3 1016 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TRIOO75962 3097 aa13.44□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MED19A0JLT2 244 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ADAM12O43184 909 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ABLIM3O94929 683 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NEFLP07196 543 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MCF2P10911 925 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CPB1P15086 417 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TARSP26639 723 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MCM4P33991 863 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CNR2P34972 360 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MATR3P43243 847 aaKnown RBP eCLIP13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CXCL12P48061 93 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NEK4P51957 841 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 OSTNP61366 133 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LRRC32Q14392 662 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ZNF568Q3ZCX4 644 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KRT79Q5XKE5 535 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 USP37Q86T82 979 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TIPINQ9BVW5 301 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 BHMT2Q9H2M3 363 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LMAN1LQ9HAT1 526 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ASAH2Q9NR71 780 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB3-203ENST00000425319 H0YCG3 227 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 FGF19O95750 216 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MYL4P12829 197 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 GDI1P31150 447 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 BRCC3P46736 316 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ALDH1A3P47895 512 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 EPHB3P54753 998 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PEX3P56589 373 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ROR1Q01973 937 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NAB2Q15742 525 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KYAT1Q16773 422 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ME3Q16798 604 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 EEF1DP3Q658K8 133 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LAIR1Q6GTX8 287 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MAML2Q8IZL2 1156 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DDX1Q92499 740 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SMARCD2Q92925 531 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TMEM60Q9H2L4 133 aa13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LILRB5O75023 590 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KCNE1P15382 129 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PAX3P23760 479 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ATXN1P54253 815 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TAF12Q16514 161 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NT5DC1Q5TFE4 455 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 PRR23BQ6ZRT6 265 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 SNX29Q8TEQ0 813 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 BSNDQ8WZ55 320 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ACO2Q99798 780 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 ZNF334Q9HCZ1 680 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 KIF3AQ9Y496 699 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 DENND4AQ7Z401 1863 aa13.41□□□□□ -0.26
HLA-DQB3-203ENST00000425319 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 I3L4J1 428 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LAD1O00515 517 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 LRP3O75074 770 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 RETP07949 1114 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 CEBPBP17676 345 aa13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
HLA-DQB3-203ENST00000425319 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms