RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 GSDMBQ8TAX9 411 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 NUDCD1Q96RS6 583 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 CDC42EP4Q9H3Q1 356 aaKnown RBP10.83□□□□□ -0.68
VPS37A-202ENST00000425020 LRRC4Q9HBW1 653 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 PFDN4Q9NQP4 134 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
VPS37A-202ENST00000425020 IGF2BP3O00425 579 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PPP1R11O60927 126 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SHBGP04278 402 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 ARL4AP40617 200 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 MAGEA4P43358 317 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 EIF3EP60228 445 aaKnown RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 AMHR2Q16671 573 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 GRAMD1BQ3KR37 738 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 GPAT2Q6NUI2 795 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PPP1R13LQ8WUF5 828 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CDKL2Q92772 493 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SYN2Q92777 582 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CALR3Q96L12 384 aaKnown RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TMBIM4Q9HC24 238 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 USP15Q9Y4E8 981 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PFASO15067 1338 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 LPXNO60711 386 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CDH16O75309 829 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PRLRP16471 622 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 MRPS9P82933 396 aaKnown RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SEPT6Q14141 434 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 DUOXA2Q1HG44 320 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TKFCQ3LXA3 575 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 KDM7AQ6ZMT4 941 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 LONP2Q86WA8 852 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PIP4K2CQ8TBX8 421 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SNX25Q9H3E2 840 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TBX20Q9UMR3 447 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 L3MBTL1Q9Y468 752 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 AGTP01019 485 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TARSP26639 723 aaKnown RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 GPC3P51654 580 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CDK17Q00537 523 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 PPP3CAQ08209 521 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 ASPHQ12797 758 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 FOXD4Q12950 439 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 NME3Q13232 169 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SLC12A1Q13621 1099 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 LRRC43Q8N309 656 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TMEM121Q9BTD3 319 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 TRAIPQ9BWF2 469 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 KCND1Q9NSA2 647 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 LRRC4BQ9NT99 713 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 AIPL1Q9NZN9 384 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
VPS37A-202ENST00000425020 AFG3L2Q9Y4W6 797 aa10.82□□□□□ -0.68
VPS37A-202ENST00000425020 CCT8L1PA6NM43 557 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SKAP2O75563 359 aaPredicted RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SFNP31947 248 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 RPL21P46778 160 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 ARFIP2P53365 341 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 ARPP19P56211 112 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SNX16P57768 344 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 TMEM119Q4V9L6 283 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 NT5DC3Q86UY8 548 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 FAM71DQ8N9W8 422 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SPDL1Q96EA4 605 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 FAM81BQ96LP2 452 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 POLR3CQ9BUI4 534 aaPredicted RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 PIM2Q9P1W9 311 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SSX2IPQ9Y2D8 614 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 PCDHB2Q9Y5E7 798 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 MEIS2O14770 477 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 MED7O43513 233 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 DGAT1O75907 488 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 HAUS5O94927 633 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 LDHAP00338 332 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 RBP3P10745 1247 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 PDGFRAP16234 1089 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 RWDD4Q6NW29 188 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 OTOP1Q7RTM1 612 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 PPWD1Q96BP3 646 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 RMDN2Q96LZ7 410 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SPATA33Q96N06 139 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 ACAD9Q9H845 621 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 PARVAQ9NVD7 372 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 DDX20Q9UHI6 824 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 CNOT7Q9UIV1 285 aaKnown RBP10.81□□□□□ -0.68
VPS37A-202ENST00000425020 AGAP1Q9UPQ3 857 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 SUGT1Q9Y2Z0 365 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 RICTORQ6R327 1708 aa10.81□□□□□ -0.68
VPS37A-202ENST00000425020 KCNN4O15554 427 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms