RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FOXD4L3Q6VB84 417 aaPredicted RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 DNM3Q9UQ16 869 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 MTMR6Q9Y217 621 aa14.22□□□□□ -0.13
VRK3-203ENST00000424804 ZFP37Q9Y6Q3 630 aaPredicted RBP14.22□□□□□ -0.13
VRK3-203ENST00000424804 OTOGLQ3ZCN5 2332 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 SHISA7A6NL88 538 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 LRRN2O75325 713 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 ABLIM3O94929 683 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 KCNE1P15382 129 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 STARD6P59095 220 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 TMEM132AQ24JP5 1023 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 SLC8B1Q6J4K2 584 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 MAML2Q8IZL2 1156 aaPredicted RBP14.21□□□□□ -0.13
VRK3-203ENST00000424804 SLC7A14Q8TBB6 771 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 LRRC15Q8TF66 581 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 SNX27Q96L92 541 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 UROC1Q96N76 676 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
VRK3-203ENST00000424804 HAPLN2Q9GZV7 340 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 CDY1Q9Y6F8 540 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 FRYLO94915 3013 aa14.21□□□□□ -0.13
VRK3-203ENST00000424804 DNAH14Q0VDD8 3507 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 PHLPP2Q6ZVD8 1323 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 BMP15O95972 392 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 DCNP07585 359 aaKnown RBP14.2□□□□□ -0.14
VRK3-203ENST00000424804 GUCY2CP25092 1073 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
VRK3-203ENST00000424804 UBA7P41226 1012 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 OSTNP61366 133 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 SLC5A9Q2M3M2 681 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 SLC10A6Q3KNW5 377 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 ARL6IP4Q66PJ3 421 aaKnown RBP14.2□□□□□ -0.14
VRK3-203ENST00000424804 PDXDC1Q6P996 788 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 NPAS3Q8IXF0 933 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 C18orf25Q96B23 403 aaPredicted RBP14.2□□□□□ -0.14
VRK3-203ENST00000424804 PLA2G2FQ9BZM2 168 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 FOXQ1Q9C009 403 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 AVENQ9NQS1 362 aaPredicted RBP14.2□□□□□ -0.14
VRK3-203ENST00000424804 ARHGEF3Q9NR81 526 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 CNTN3Q9P232 1028 aa14.2□□□□□ -0.14
VRK3-203ENST00000424804 GPR179Q6PRD1 2367 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 DMXL1Q9Y485 3027 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 WDR27A2RRH5 827 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 SLC16A4O15374 487 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 SEC24AO95486 1093 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 MCF2P10911 925 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 SLC12A3P55017 1021 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 ROR1Q01973 937 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 GRIN1Q05586 938 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 ARSHQ5FYA8 562 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 SPECC1Q5M775 1068 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 LIN9Q5TKA1 542 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 ANKS3Q6ZW76 656 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 RTL10Q7L3V2 364 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 TMEM161BQ8NDZ6 487 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 ZNF461Q8TAF7 563 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 SPIRE2Q8WWL2 714 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 KCNN1Q92952 543 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 NKD2Q969F2 451 aaPredicted RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 CALML4Q96GE6 196 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 MRPL4Q9BYD3 311 aaKnown RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 KMT5AQ9NQR1 393 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
VRK3-203ENST00000424804 MTF2Q9Y483 593 aaPredicted RBP14.19□□□□□ -0.14
VRK3-203ENST00000424804 F5P12259 2224 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 PODXLO00592 558 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 XYLBO75191 536 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
VRK3-203ENST00000424804 FZD5Q13467 585 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 ZBTB6Q15916 424 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 ZNF568Q3ZCX4 644 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 SEZ6Q53EL9 994 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 PRSS36Q5K4E3 855 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 MPZL3Q6UWV2 235 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 SYT2Q8N9I0 419 aaPredicted RBP14.18□□□□□ -0.14
VRK3-203ENST00000424804 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 ACAP3Q96P50 834 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 CCDC94Q9BW85 323 aaPredicted RBP14.18□□□□□ -0.14
VRK3-203ENST00000424804 C17orf75Q9HAS0 396 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 SIT1Q9Y3P8 196 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
VRK3-203ENST00000424804 PATJQ8NI35 1801 aa14.18□□□□□ -0.14
VRK3-203ENST00000424804 NPHP3-ACAD11A0A0J9YXS1 232 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 STK25O00506 426 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 MOSPD3O75425 235 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 VNN2O95498 520 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 RHOP08100 348 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 SP9P0CG40 484 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 FCARP24071 287 aa14.17□□□□□ -0.14
VRK3-203ENST00000424804 LONP1P36776 959 aaKnown RBP14.17□□□□□ -0.14
VRK3-203ENST00000424804 CCR2P41597 374 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms