RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 STMN1P16949 149 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 DESP17661 470 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CASQ1P31415 396 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CASP5P51878 434 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 DRG2P55039 364 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ADAM17P78536 824 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 TMF1P82094 1093 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ANKRD45Q5TZF3 282 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CYP4F22Q6NT55 531 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SLC30A6Q6NXT4 461 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ABRAXAS1Q6UWZ7 409 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 VSIG1Q86XK7 387 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 TMTC1Q8IUR5 882 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SYTL1Q8IYJ3 562 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 GRAMD1CQ8IYS0 662 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SAMD14Q8IZD0 417 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 TTC9BQ8N6N2 239 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SSH3Q8TE77 659 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 UCMAQ8WVF2 138 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 LRTOMTQ8WZ04 291 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 LOXL4Q96JB6 756 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 TMEM209Q96SK2 561 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 GPR20Q99678 358 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 GTPBP4Q9BZE4 634 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 KIAA1683Q9H0B3 1180 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 BHMT2Q9H2M3 363 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 DHX36Q9H2U1 1008 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 L2HGDHQ9H9P8 463 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 DIAPH3Q9NSV4 1193 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SPTLC3Q9NUV7 552 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 THG1LQ9NWX6 298 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ORC3Q9UBD5 711 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ASH2LQ9UBL3 628 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF112Q9UJU3 913 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 HDAC5Q9UQL6 1122 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 SIK3Q9Y2K2 1263 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CAPN8A6NHC0 703 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 H7C0S8 307 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 FFAR2O15552 330 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 B3GALT2O43825 422 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 AHCYL1O43865 530 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 USO1O60763 962 aaKnown RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 TMEM127O75204 238 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CRTAMO95727 393 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 LRG1P02750 347 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SOD2P04179 222 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SLC3A2P08195 630 aaKnown RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 POU2F2P09086 479 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 INSRRP14616 1297 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ALOX12P18054 663 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 LIFRP42702 1097 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CALD1Q05682 793 aaKnown RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CDC16Q13042 620 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SCARB2Q14108 478 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 POLD3Q15054 466 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SURF1Q15526 300 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 FAM209BQ5JX69 171 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 FAM205BPQ63HN1 556 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 NUGGCQ68CJ6 796 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 RSPO2Q6UXX9 243 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 TMC5Q6UXY8 1006 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 BTN2A1Q7KYR7 527 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 RASGRP2Q7LDG7 609 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 KDELC2Q7Z4H8 507 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 PLEKHH3Q7Z736 793 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CACNA2D3Q8IZS8 1091 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CCDC191Q8NCU4 936 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 TTLL11Q8NHH1 800 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CHTF18Q8WVB6 975 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ZCCHC14Q8WYQ9 949 aaKnown RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ANP32BQ92688 251 aaKnown RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 MVB12AQ96EY5 273 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SAMD11Q96NU1 681 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 NCAPGQ9BPX3 1015 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 B3GNT5Q9BYG0 378 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CDIP1Q9H305 208 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 SLC6A20Q9NP91 592 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ITM2CQ9NQX7 267 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 PLSCR4Q9NRQ2 329 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 WDR35Q9P2L0 1181 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 B4GALT6Q9UBX8 382 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 AASSQ9UDR5 926 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 CROTQ9UKG9 612 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ZHX1Q9UKY1 873 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-205ENST00000424674 L1RE1Q9UN81 338 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 MYRFQ9Y2G1 1151 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF536O15090 1300 aa4.17□□□□□ -1.74
SF3B1-205ENST00000424674 MPHOSPH10O00566 681 aaKnown RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 KPNA5O15131 536 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 LAMTOR5O43504 91 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 B4GALT3O60512 393 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 UBXN7O94888 489 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 STARD3NLO95772 234 aa4.16□□□□□ -1.74
SF3B1-205ENST00000424674 HPDP32754 393 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-205ENST00000424674 IL13P35225 146 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms