RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 FTHL17Q9BXU8 183 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 INTS2Q9H0H0 1204 aaKnown RBP14.51□□□□□ -0.09
PRPF39-202ENST00000424478 TMEM8AQ9HCN3 771 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 DPP3Q9NY33 737 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 LRFN2Q9ULH4 789 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 AGAP1Q9UPQ3 857 aa14.51□□□□□ -0.09
PRPF39-202ENST00000424478 MAPK13O15264 365 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 WDR5P61964 334 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 C9orf50Q5SZB4 431 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 PHLDB3Q6NSJ2 640 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 TRIM65Q6PJ69 517 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 MRPL10Q7Z7H8 261 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 LMO3Q8TAP4 145 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 APOBEC3GQ9HC16 384 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 IL23AQ9NPF7 189 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 CNTN3Q9P232 1028 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 NXF1Q9UBU9 619 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 POLIQ9UNA4 740 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 FHOD1Q9Y613 1164 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 NT5C1B-RDH14C9J2C7 533 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ZNF623O75123 536 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 NOL4O94818 638 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 DDHD2O94830 711 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 NCOA4Q13772 614 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ARHGAP44Q17R89 818 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 C15orf39Q6ZRI6 1047 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 APBB1IPQ7Z5R6 666 aaPredicted RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ZNF830Q96NB3 372 aaPredicted RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 SIX2Q9NPC8 291 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 PDCD11Q14690 1871 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 CBFA2T2O43439 604 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 CSPG5O95196 566 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 IL18RAPO95256 599 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ITGB1P05556 798 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 RAP1GAPP47736 663 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 CLCNKBP51801 687 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 POLR2FP61218 127 aaKnown RBP14.5□□□□□ -0.09
PRPF39-202ENST00000424478 CLDN10P78369 228 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 EPC2Q52LR7 807 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 C3orf58Q8NDZ4 430 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 FBXL13Q8NEE6 735 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ANKRD36BP1Q96IX9 119 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 ACP6Q9NPH0 428 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 RAB20Q9NX57 234 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 XIRP2A4UGR9 3374 aa14.5□□□□□ -0.09
PRPF39-202ENST00000424478 TBKBP1A7MCY6 615 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 TNNC2P02585 160 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 GYPCP04921 128 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
PRPF39-202ENST00000424478 CASP14P31944 242 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 FAM189BP81408 668 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 ORC1Q13415 861 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 RAPGEF1Q13905 1077 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 TMEM240Q5SV17 173 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 FAM109BQ6ICB4 259 aaPredicted RBP14.49□□□□□ -0.09
PRPF39-202ENST00000424478 DPY19L2P1Q6NXN4 242 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 GBP6Q6ZN66 633 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 MRFAP1L1Q96HT8 127 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 PRG3Q9Y2Y8 225 aaPredicted RBP14.49□□□□□ -0.09
PRPF39-202ENST00000424478 NUB1Q9Y5A7 615 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 RALGAPA2Q2PPJ7 1873 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 GRXCR1A8MXD5 290 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 RAB27AP51159 221 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 ARID5AQ03989 594 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 NAB2Q15742 525 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 SPECC1LQ69YQ0 1117 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 GLB1LQ6UWU2 654 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 SPRED2Q7Z698 418 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 PPM1KQ8N3J5 372 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 APBB2Q92870 758 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 PPP1R10Q96QC0 940 aaKnown RBP14.49□□□□□ -0.09
PRPF39-202ENST00000424478 ASB7Q9H672 318 aa14.49□□□□□ -0.09
PRPF39-202ENST00000424478 SPTLC1O15269 473 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 HCRTO43612 131 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 THP07101 528 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 MAGEA10P43363 369 aaPredicted RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 CDH8P55286 799 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 BCAR1P56945 870 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 RNASELQ05823 741 aaKnown RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 ZBTB6Q15916 424 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 ABI1Q8IZP0 508 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 LBHD1Q9BQE6 289 aaPredicted RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TRAIPQ9BWF2 469 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TBC1D13Q9NVG8 400 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TMEM161AQ9NX61 479 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 ZC3H11AO75152 810 aaKnown RBP eCLIP14.48□□□□□ -0.096e-6■□□□□ 11.2
PRPF39-202ENST00000424478 FGBP02675 491 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TRPC3Q13507 836 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 E4F1Q66K89 784 aaPredicted RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 CRIPAKQ8N1N5 446 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 PGBD4Q96DM1 585 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 UBE2TQ9NPD8 197 aaPredicted RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 GIT1Q9Y2X7 761 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TPM3P06753 285 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 IQCEQ6IPM2 695 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms